RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 OR6N1Q8NGY5 312 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 OR14K1Q8NGZ2 314 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 C8orf46Q8TAG6 207 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 KLF14Q8TD94 323 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 ITLN1Q8WWA0 313 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 MAGEB18Q96M61 343 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 OXGR1Q96P68 337 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TSSK3Q96PN8 268 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 ZNF382Q96SR6 550 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 TMEM246Q9BRR3 403 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 DCTN5Q9BTE1 182 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 OR2J1Q9GZK6 312 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 NPFFR1Q9GZQ6 430 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 REEP4Q9H6H4 257 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 TCF7L2Q9NQB0 619 aa4.33□□□□□ -1.72
HERC1-213ENST00000561359 EXOSC3Q9NQT5 275 aaKnown RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 ZMAT5Q9UDW3 170 aaKnown RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 NUP214P35658 2090 aaPredicted RBP4.33□□□□□ -1.72
HERC1-213ENST00000561359 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 A0A1W2PRD5 423 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 A0A1W2PRF3 423 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 A0A1W2PRM7 423 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 CFAP73A6NFT4 308 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 DUXAA6NLW8 204 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 E7ESA3 106 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 H3BUX3 64 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 PGRMC1O00264 195 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 SURF4O15260 269 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 FZD7O75084 574 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 ENTPD5O75356 428 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 SEC22BO75396 215 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 FARS2O95363 451 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 AHSA1O95433 338 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 CYB5R3P00387 301 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 ENO1P06733 434 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 TFPTP0C1Z6 253 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 ZNF26P17031 533 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 EEF1B2P24534 225 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 APLNRP35414 380 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 RPS19P39019 145 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 ANXA11P50995 505 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 MNAT1P51948 309 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 DGCR2P98153 550 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 HABP2Q14520 560 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 SMU1Q2TAY7 513 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 XKR7Q5GH72 579 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 MTX3Q5HYI7 312 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 MBNL2Q5VZF2 373 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 KANK2Q63ZY3 851 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 CADM2Q8N3J6 435 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 SLC22A24Q8N4F4 322 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 OR5AK3PQ8NH89 298 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 CLHC1Q8NHS4 586 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 VANGL1Q8TAA9 524 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 SLC25A40Q8TBP6 338 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 PNPT1Q8TCS8 783 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 NPRL2Q8WTW4 380 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 GATAD1Q8WUU5 269 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 ZNF764Q96H86 408 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 LRR1Q96L50 414 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 OR5M11Q96RB7 305 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 KCNA7Q96RP8 456 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 MECRQ9BV79 373 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 EMC6Q9BV81 110 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 ZNF350Q9GZX5 532 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 SIRPDQ9H106 197 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 OR10A2Q9H208 303 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 RANBP3Q9H6Z4 567 aaPredicted RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 RAB18Q9NP72 206 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 INPP5EQ9NRR6 644 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 B3GAT1Q9P2W7 334 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 EIF3KQ9UBQ5 218 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 TBK1Q9UHD2 729 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 WDR45Q9Y484 360 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
HERC1-213ENST00000561359 MAB21L2Q9Y586 359 aa4.32□□□□□ -1.72
HERC1-213ENST00000561359 MEIOCA2RUB1 952 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 ZNF726A6NNF4 738 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 A8MT66 165 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 NPIPB8E9PQR5 432 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 IFNL4K9M1U5 179 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 AIM2O14862 343 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 CFLARO15519 480 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 TBX19O60806 448 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SEC31AO94979 1220 aaKnown RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 MATN1P21941 496 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 CHATP28329 748 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SDHAP31040 664 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SOAT1P35610 550 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 RPS5P46782 204 aaKnown RBP4.31□□□□□ -1.72
HERC1-213ENST00000561359 NPY4RP50391 375 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 SERPINB8P50452 374 aa4.31□□□□□ -1.72
HERC1-213ENST00000561359 PPP1CBP62140 327 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms