RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 VIMP08670 466 aaKnown RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 CBLP22681 906 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 AHCYP23526 432 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 STOMP27105 288 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 CHI3L1P36222 383 aaPredicted RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 KIR2DS4P43632 304 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 NPY4RP50391 375 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 GDI2P50395 445 aaKnown RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 KRTAP10-11P60412 298 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 PPP1CBP62140 327 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 PTGR1Q14914 329 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 FRMD7Q6ZUT3 714 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 NET1Q7Z628 596 aaPredicted RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 ZNF101Q8IZC7 436 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 C1orf87Q8N0U7 546 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 SCAIQ8N9R8 606 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 ADPRHL1Q8NDY3 354 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 OR4K5Q8NGD3 323 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 OR4A15Q8NGL6 344 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 OR2T11Q8NH01 316 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 OR2V2Q96R30 315 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 ASPNQ9BXN1 380 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 RAB18Q9NP72 206 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 TMEM38BQ9NVV0 291 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 RPS6KB2Q9UBS0 482 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 RPUSD1Q9UJJ7 312 aaKnown RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 ZFPL1O95159 310 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 CYB5R3P00387 301 aaPredicted RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 LINC00032P0C843 101 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 KITP10721 976 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 HLA-DOBP13765 273 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 IRF2P14316 349 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 MMP9P14780 707 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 PRPS1L1P21108 318 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 GSTM3P21266 225 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 EEF1B2P24534 225 aaKnown RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 RPL14P50914 215 aaKnown RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 MPP2Q14168 576 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 TAF11Q15544 211 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 PGS1Q32NB8 556 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 ZNF404Q494X3 552 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 LIN52Q52LA3 116 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 RUNDC3AQ59EK9 446 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 LRRC74BQ6ZQY2 392 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 DCDC5Q6ZRR9 648 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 PAPD5Q8NDF8 572 aaKnown RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 WFDC9Q8NEX5 89 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 AGR3Q8TD06 166 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 NPRL2Q8WTW4 380 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 NSMAFQ92636 917 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 COQ8BQ96D53 544 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 TXNDC15Q96J42 360 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 TRNT1Q96Q11 434 aaKnown RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 ARMC7Q9H6L4 198 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 RANBP3Q9H6Z4 567 aaPredicted RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 MTHFD2LQ9H903 347 aaPredicted RBP7.87□□□□□ -1.15
HERC1-210ENST00000560897 ELOVL3Q9HB03 270 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 GCM1Q9NP62 436 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 CCNB1IP1Q9NPC3 277 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 MAN2C1Q9NTJ4 1040 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 RLIMQ9NVW2 624 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 GLTPQ9NZD2 209 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 RAP2CQ9Y3L5 183 aa7.87□□□□□ -1.15
HERC1-210ENST00000560897 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 TRAV36DV7A0A075B6V5 113 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 A0A087WUJ7 227 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CDHR4A6H8M9 788 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 TRPC5OSA6NMA1 111 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 FZD7O75084 574 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CLIC3O95833 236 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 HPRP00739 348 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 IFNW1P05000 195 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 TROVE2P10155 538 aaKnown RBP eCLIP7.86□□□□□ -1.15
HERC1-210ENST00000560897 NR2F1P10589 423 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CD28P10747 220 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 FAHP16930 419 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 WNT5AP41221 380 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 ACAA2P42765 397 aaKnown RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 ZNF84P51523 738 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 BIDP55957 195 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 EGR4Q05215 589 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 PUDPQ08623 228 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 COX10Q12887 443 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 PABPC1L2AQ5JQF8 200 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 TMEM255AQ5JRV8 349 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 NXNQ6DKJ4 435 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 ARL9Q6T311 187 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 RFPL4BQ6ZWI9 263 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CLECL1Q8IZS7 167 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 LRRC18Q8N456 261 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 KRTCAP2Q8N6L1 136 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 ANKFN1Q8N957 763 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 ATG16L2Q8NAA4 619 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 ZNF420Q8TAQ5 688 aaPredicted RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 TAAR8Q969N4 342 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 PPP3R2Q96LZ3 170 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CITED2Q99967 270 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms