RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 OR6V1Q8N148 313 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 FTMTQ8N4E7 242 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 EIF4E3Q8N5X7 224 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 MRPL43Q8N983 215 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 EXD3Q8N9H8 876 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CDRT4Q8N9R6 151 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 DNAAF1Q8NEP3 725 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR10H4Q8NGA5 316 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR4K14Q8NGD5 310 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR2T27Q8NH04 317 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 LHFPL5Q8TAF8 219 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CEP76Q8TAP6 659 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 C15orf40Q8WUR7 153 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 THEM6Q8WUY1 208 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZFPM2Q8WW38 1151 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 LIPHQ8WWY8 451 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 RAB40AQ8WXH6 277 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ASB13Q8WXK3 278 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ASB12Q8WXK4 309 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 THAP4Q8WY91 577 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ING5Q8WYH8 240 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SUSD6Q92537 303 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CNOT9Q92600 299 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 THRSPQ92748 146 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 KAT2AQ92830 837 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 GHSRQ92847 366 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 RBPMSQ93062 196 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 PTP4A1Q93096 173 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CTHRC1Q96CG8 243 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 HAVCR1Q96D42 359 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 BPIFA2Q96DR5 249 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MRPL48Q96GC5 212 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 CAPNS2Q96L46 248 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF578Q96N58 590 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 ERMAPQ96PL5 475 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 DERL3Q96Q80 235 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR2M4Q96R27 311 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR2A7Q96R45 310 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CCNL2Q96S94 520 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 SERINC2Q96SA4 455 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 DDOQ99489 341 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TBX5Q99593 518 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF559Q9BR84 538 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 LMF2Q9BU23 707 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 TRMT61BQ9BVS5 477 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 IFT27Q9BW83 186 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 REG4Q9BYZ8 158 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SLC19A3Q9BZV2 496 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF436Q9C0F3 470 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 RSPH9Q9H1X1 276 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 XKR8Q9H6D3 395 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 IL21RQ9HBE5 538 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 HRASLSQ9HDD0 168 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MBNL1Q9NR56 388 aaKnown RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 KLHL1Q9NR64 748 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SPHK1Q9NYA1 384 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 TAS2R5Q9NYW4 299 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 OR6C2Q9NZP2 312 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 AKAP7Q9P0M2 348 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 PIPOXQ9P0Z9 390 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 HCN3Q9P1Z3 774 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 KLHL9Q9P2J3 617 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 DEC1Q9P2X7 70 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 THAP10Q9P2Z0 257 aaPredicted RBP2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF222Q9UK12 451 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 FBXL4Q9UKA2 621 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PILRAQ9UKJ1 303 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 DAPP1Q9UN19 280 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 COPS3Q9UNS2 423 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 RCE1Q9Y256 329 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 KCNK6Q9Y257 313 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 CA5BQ9Y2D0 317 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MED31Q9Y3C7 131 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 MAB21L2Q9Y586 359 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SLC22A7Q9Y694 548 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 ZNF780BQ9Y6R6 833 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 SPTBP11277 2137 aa2.21□□□□□ -2.06
SPG11-223ENST00000560858 PDE4DIPQ5VU43 2346 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 FREM3P0C091 2139 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 TNRC6BQ9UPQ9 1833 aaKnown RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 IGKV1D-42A0A075B6H8 117 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 A0A087WUJ7 227 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 NPIPA5A0A0B4J1W7 369 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 TRBV2A0A0J9YWF9 115 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GTI1 187 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 A0A1B0GVC2 190 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 A0A1W2PPL8 197 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PLSCR5A0PG75 271 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CIB4A0PJX0 185 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 URADA6NGE7 173 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 A6NIN4 97 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ACOD1A6NK06 481 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR52A4PA6NMU1 304 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 EFCAB7A8K855 629 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 HMSDA8MTL9 139 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PRR32B1ATL7 298 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 C10orf142B7Z368 130 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 KRBOX1C9JBD0 128 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MCRIP1C9JLW8 97 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms