RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 MS4A18H0YCH9 400 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 CXCR6O00574 342 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 RFXANKO14593 260 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 HOXA3O43365 443 aaPredicted RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 TPD52L2O43399 206 aaKnown RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 TPST1O60507 370 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 PLATP00750 562 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 IGHV1-46P01743 117 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 IGHV2-70P01814 119 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 NR2F1P10589 423 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 HOXB6P17509 224 aaKnown RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 CBLP22681 906 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 RBBP4Q09028 425 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 CAMK2DQ13557 499 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 MS4A18Q3C1V0 323 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 FAM98BQ52LJ0 330 aaKnown RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 RPS26P11Q5JNZ5 115 aaPredicted RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 FAM209AQ5JX71 171 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 FAM69AQ5T7M9 428 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 OLFML2AQ68BL7 652 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 WDR88Q6ZMY6 472 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 Q6ZPA2 131 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 ZBTB49Q6ZSB9 765 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 FKBP9P1Q75LS8 142 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 H1FNTQ75WM6 255 aaPredicted RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 UEVLDQ8IX04 471 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 PEX5LQ8IYB4 626 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 OR52P1PQ8NH57 321 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 ZNF519Q8TB69 540 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 MYCBPQ99417 103 aaPredicted RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 SLC29A1Q99808 456 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 RSPO3Q9BXY4 272 aaPredicted RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 IKZF5Q9H5V7 419 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
TPM1-225ENST00000560679 GORASP2Q9H8Y8 452 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 DECR2Q9NUI1 292 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 SLCO1C1Q9NYB5 712 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 C1RLQ9NZP8 487 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 GPR160Q9UJ42 338 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
TPM1-225ENST00000560679 A0A1B0GUS0 222 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SLC22A23A1A5C7 686 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 F5H0A9 414 aaPredicted RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 SOCS2O14508 198 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 TIMM23O14925 209 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SPRY3O43610 288 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 MFN2O95140 757 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SNAP29O95721 258 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 IGHV3-13P01766 116 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 LCKP06239 509 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 RAP2AP10114 183 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 MPV17P39210 176 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 GZMMP51124 257 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 ZNF81P51508 661 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 MMP15P51511 669 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 MVDP53602 400 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SELENOVP59797 346 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 TXNL4AP83876 142 aaKnown RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 PAX2Q02962 417 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 LRRC74AQ0VAA2 488 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 PMS2P3Q13401 168 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 ANXA8L1Q5VT79 327 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SLC22A24Q8N4F4 322 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 CBR4Q8N4T8 237 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 OR10A6Q8NH74 314 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 GEMIN6Q8WXD5 167 aaKnown RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 UBE2FQ969M7 185 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 FAM162AQ96A26 154 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SLC41A3Q96GZ6 507 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 CNBD2Q96M20 576 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SEPHS2Q99611 448 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SH3GL3Q99963 347 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 CHID1Q9BWS9 393 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SPATA9Q9BWV2 254 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 BEX1Q9HBH7 125 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 B3GAT2Q9NPZ5 323 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 SLC6A13Q9NSD5 602 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 TESQ9UGI8 421 aaKnown RBP8.34□□□□□ -1.07
TPM1-225ENST00000560679 BTNL2Q9UIR0 455 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 DNAH9Q9NYC9 4486 aa8.34□□□□□ -1.07
TPM1-225ENST00000560679 A0A087WUJ7 227 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 EVPLLA8MZ36 301 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 NDUFA7O95182 113 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 TNFAIP8O95379 198 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 NGFP01138 241 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 BCHEP06276 602 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 SMIM18P0DKX4 95 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 ETFAP13804 333 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 SELEP16581 610 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 PPIBP23284 216 aaKnown RBP8.33□□□□□ -1.08
TPM1-225ENST00000560679 HTR2AP28223 471 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 CD80P33681 288 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 MTNR1AP48039 350 aa8.33□□□□□ -1.08
TPM1-225ENST00000560679 SLC6A9P48067 706 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms