RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SPATA46Q5T0L3 261 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 OTPQ5XKR4 325 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 TMEM154Q6P9G4 183 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 DNM1P34Q6PK57 102 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 UGT2A3Q6UWM9 527 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 UNQ6126/PRO20091Q6UXV3 157 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 DPY19L2P2Q6ZN68 376 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 FAM122BQ7Z309 247 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 ZER1Q7Z7L7 766 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 ADCK1Q86TW2 530 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 OR9Q2Q8NGE9 314 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 OR52L1Q8NGH7 329 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 GNPDA2Q8TDQ7 276 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 SAMD8Q96LT4 415 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 GPX7Q96SL4 187 aaPredicted RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 GPA33Q99795 319 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 FUZQ9BT04 418 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 THTPAQ9BU02 230 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 WNT5BQ9H1J7 359 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 MS4A5Q9H3V2 200 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 POLE4Q9NR33 117 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 TAAR3PQ9P1P4 343 aa7.04□□□□□ -1.28
SNX1-207ENST00000559401 PRPF19Q9UMS4 504 aaKnown RBP7.04□□□□□ -1.28
SNX1-207ENST00000559401 HIVEP2P31629 2446 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ZNF469Q96JG9 3925 aaPredicted RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 A8MV72 311 aaPredicted RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 IMPA2O14732 288 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 GYG2O15488 501 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 SGCEO43556 437 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 TLX2O43763 284 aaPredicted RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 AHCYL1O43865 530 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 KRT36O76013 467 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 CCNB2O95067 398 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ABHD16AO95870 558 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 SCG5P05408 212 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 T-ENOLP0DO92 83 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 NAT2P11245 290 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 APEHP13798 732 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 CDKN2AP42771 156 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 ARHGDIAP52565 204 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 FXYD6P3P58550 94 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 PPP1R8Q12972 351 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 TSPAN31Q12999 210 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 AQP6Q13520 282 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 RFX4Q33E94 735 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ZNF718Q3SXZ3 478 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 CLEC12AQ5QGZ9 265 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 LCN8Q6JVE9 175 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 C1orf94Q6P1W5 598 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 PGBD2Q6P3X8 592 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 LEG1Q6P5S2 330 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ARL9Q6T311 187 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 FOXL2NBQ6ZUU3 175 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 PTCHD4Q6ZW05 846 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 RFPL4BQ6ZWI9 263 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 TRPM8Q7Z2W7 1104 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 GLB1L2Q8IW92 636 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ZNF101Q8IZC7 436 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ZNF540Q8NDQ6 660 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 OR4K13Q8NH42 304 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ABHD4Q8TB40 342 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ASB9Q96DX5 294 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 CLPTM1LQ96KA5 538 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 POM121L2Q96KW2 1035 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 TSSK2Q96PF2 358 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 NMNAT3Q96T66 252 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 TRIM15Q9C019 465 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 BPESC1Q9GZL8 116 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 NUAK2Q9H093 628 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 FN3KQ9H479 309 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 MAGIXQ9H6Y5 334 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 REEP1Q9H902 201 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 SRA1Q9HD15 236 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 HINT3Q9NQE9 182 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 PLEK2Q9NYT0 353 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 ASH2LQ9UBL3 628 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 NDRG4Q9ULP0 352 aaKnown RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 COA3Q9Y2R0 106 aaPredicted RBP7.03□□□□□ -1.28
SNX1-207ENST00000559401 LYVE1Q9Y5Y7 322 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 U3KQV3 271 aa7.03□□□□□ -1.28
SNX1-207ENST00000559401 CSPG4Q6UVK1 2322 aa7.02□□□□□ -1.28
SNX1-207ENST00000559401 FN1P02751 2386 aaKnown RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 A0A096LNT2 108 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 IGHV4-61A0A0C4DH41 118 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 PLSCR5A0PG75 271 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 VWC2LB2RUY7 222 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 UBOX5O94941 541 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 MPZL1O95297 269 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 GPANK1O95872 356 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 TXNDC12O95881 172 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 HLA-DQA2P01906 255 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 HPXP02790 462 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 IGFBP1P08833 259 aaPredicted RBP7.02□□□□□ -1.29
SNX1-207ENST00000559401 ZNF250P15622 560 aa7.02□□□□□ -1.29
SNX1-207ENST00000559401 HIST1H1CP16403 213 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms