RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SPRR3Q9UBC9 169 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 UXTQ9UBK9 157 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RIMS3Q9UJD0 308 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 DNAJC12Q9UKB3 198 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ADAM28Q9UKQ2 775 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 PACSIN2Q9UNF0 486 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SAMD4AQ9UPU9 718 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RBMX2Q9Y388 322 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 WDR45Q9Y484 360 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 HES2Q9Y543 173 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GON4LQ3T8J9 2241 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RIF1Q5UIP0 2472 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 VPS13AQ96RL7 3174 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 EPG5Q9HCE0 2579 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZFHX4Q86UP3 3567 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 IGKV6D-21A0A0A0MT36 114 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 KLF18A0A0U1RQI7 1052 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 TMEM120BA0PK00 339 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ERI2A8K979 691 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF879B4DU55 563 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 G3V4G9 280 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 K7ENP7 123 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PGRMC1O00264 195 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PFKFB2O60825 505 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 CDH16O75309 829 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PAEPP09466 180 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 DBTP11182 482 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PRPS2P11908 318 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 HNF1AP20823 631 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 RRM2P31350 389 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 GTF2H1P32780 548 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 SERPINB5P36952 375 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 NUP62P37198 522 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 RPS9P46781 194 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 MEOX2P50222 304 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 YWHAEP62258 255 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 RIPPLY1Q0D2K3 151 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 RAB40BQ12829 278 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 NAB1Q13506 487 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 POU6F1Q14863 301 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 SYPL1Q16563 259 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 NDUFA9Q16795 377 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ATAD3BQ5T9A4 648 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 WSCD1Q658N2 575 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PTRHD1Q6GMV3 140 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 C3orf33Q6P1S2 294 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 FAM199XQ6PEV8 388 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 Q6ZR54 194 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 TAS2R42Q7RTR8 314 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 HDDC2Q7Z4H3 204 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 VASH2Q86V25 355 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZBTB8OSQ8IWT0 167 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 STXBP6Q8NFX7 210 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 OR52M1Q8NGK5 317 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 OR9A1PQ8NGU1 263 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 OR52N1Q8NH53 320 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 GRPEL2Q8TAA5 225 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 AENQ8WTP8 325 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 IL1F10Q8WWZ1 152 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 MARC2Q969Z3 335 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF707Q96C28 371 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 CNOT6LQ96LI5 555 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF578Q96N58 590 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 AMDHD1Q96NU7 426 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 BIRC8Q96P09 236 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 XPO6Q96QU8 1125 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 CYP2S1Q96SQ9 504 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 CITED1Q99966 193 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 OMDQ99983 421 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PPDPFQ9H3Y8 114 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 NXF3Q9H4D5 531 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 WRAP73Q9P2S5 460 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 STX18Q9P2W9 335 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 RNF14Q9UBS8 474 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 GNPTGQ9UJJ9 305 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 MRPS7Q9Y2R9 242 aaKnown RBP3.42□□□□□ -1.86
PRPF39-212ENST00000557477 PPIAL4AQ9Y536 164 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 ALG6Q9Y672 507 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 MAD1L1Q9Y6D9 718 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 DCHS1Q96JQ0 3298 aa3.42□□□□□ -1.86
PRPF39-212ENST00000557477 DMXL1Q9Y485 3027 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 HCFC1P51610 2035 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 EP300Q09472 2414 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 FAM168BA1KXE4 195 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TMEM210A6NLX4 147 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 GPR89AB7ZAQ6 455 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 F8W036 122 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 I3L4J1 428 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 WRBO00258 174 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 BTN3A3O00478 584 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 KPNA4O00629 521 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TXNDC9O14530 226 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ACOX3O15254 700 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms