RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PRAMEF7Q5VXH5 474 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TTC19Q6DKK2 380 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 PNCKQ6P2M8 343 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 EPGNQ6UW88 154 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 UNC5DQ6UXZ4 953 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 DLEU7Q6UYE1 221 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 WASH2PQ6VEQ5 465 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CYHR1Q6ZMK1 362 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 LPCAT2Q7L5N7 544 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TAS2R42Q7RTR8 314 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 LRRC70Q7Z2Q7 622 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HORMAD1Q86X24 394 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 MMAAQ8IVH4 418 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 CPNE9Q8IYJ1 553 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 BATF2Q8N1L9 274 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 LINC01555Q8NAE3 123 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 MGARPQ8TDB4 240 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CXorf40AQ8TE69 158 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 EEF1AKMT1Q8WVE0 214 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CLDN23Q96B33 292 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 SLC25A38Q96DW6 304 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 WDR34Q96EX3 536 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 DCUN1D1Q96GG9 259 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 TMEM237Q96Q45 408 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ATP6V0BQ99437 205 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CDX2Q99626 313 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 PAIP2Q9BPZ3 127 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 RIOK2Q9BVS4 552 aaKnown RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 SPATA16Q9BXB7 569 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 GPR174Q9BXC1 333 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 C20orf27Q9GZN8 174 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ABCG8Q9H221 673 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 C1orf21Q9H246 121 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 EHD1Q9H4M9 534 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ZNF385DQ9H6B1 395 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 ALG9Q9H6U8 611 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 COG4Q9H9E3 785 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PARVBQ9HBI1 364 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CYTL1Q9NRR1 136 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HEBP1Q9NRV9 189 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 NDUFA13Q9P0J0 144 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 PCTPQ9UKL6 214 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 RAB26Q9ULW5 256 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 SLC17A4Q9Y2C5 497 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 HEATR5AQ86XA9 2040 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 DOCK10Q96BY6 2186 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
VRK1-207ENST00000557352 OTOGLQ3ZCN5 2332 aa2.5□□□□□ -2.01
VRK1-207ENST00000557352 CNOT1A5YKK6 2376 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 A0A0G2JND7 137 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 K7EPI3 171 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 UBXN8O00124 270 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CDC7O00311 574 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SDHDO14521 159 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 AZIN1O14977 448 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 KMOO15229 486 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 LCMT2O60294 686 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 STK16O75716 305 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 KIAA0754O94854 1291 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SUPT7LO94864 414 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CDK14O94921 469 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 KLF8O95600 359 aaPredicted RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 OTCP00480 354 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 NPPAP01160 153 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SLC4A1P02730 911 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CATP04040 527 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 RPN2P04844 631 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ANXA5P08758 320 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 HLA-EP13747 358 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 GFAPP14136 432 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 HNRNPA2B1P22626 353 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 CALB2P22676 271 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SERPINB1P30740 379 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CA5AP35218 305 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 UGT1A3P35503 534 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 UGT1A5P35504 534 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 GPR1P46091 355 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 OR3A4PP47883 348 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 TPMTP51580 245 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ARFIP1P53367 373 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 METAP1P53582 386 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 AQP5P55064 265 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 LINC00315P59091 139 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 PFN3P60673 137 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 IFT88Q13099 833 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 LASP1Q14847 261 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 PON2Q15165 354 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 IRF4Q15306 451 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 TSNQ15631 228 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 CD226Q15762 336 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ACSBG2Q5FVE4 666 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 COQ5Q5HYK3 327 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SPATA46Q5T0L3 261 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 RAET1GQ6H3X3 334 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 TFAP2EQ6VUC0 442 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ZCCHC23Q6ZST2 131 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CCDC121Q6ZUS5 278 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 FRA10AC1Q70Z53 315 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 MOB1BQ7L9L4 216 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ZNF547Q8IVP9 402 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms