RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	CENPVL3	A0A0U1RRI6	287 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PLSCR5	A0PG75	271 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076		A8MVM7	634 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	P2RY10	O00398	339 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SPRY3	O43610	288 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	NPIPB7	O75200	414 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	BCAS1	O75363	584 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SEC22B	O75396	215 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SUPT7L	O94864	414 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MFN2	O95140	757 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	UBL3	O95164	117 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SNAP29	O95721	258 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	CHEK2	O96017	543 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PTH	P01270	115 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	LCK	P06239	509 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	LIPF	P07098	398 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	TFPT	P0C1Z6	253 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR12D1	P0DN82	309 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	IGLL1	P15814	213 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	IMPDH1	P20839	514 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PRPH2	P23942	346 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	CXCR1	P25024	350 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PEX2	P28328	305 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	GABRA5	P31644	462 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MDH2	P40926	338 aa	Known RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	KIR2DS4	P43632	304 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	HTR6	P50406	440 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF75D	P51815	510 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	EFNB2	P52799	333 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	AQP5	P55064	265 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	FGF12	P61328	243 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	RBBP4	Q09028	425 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	EGFEM1P	Q0D2K5	195 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PMS2P3	Q13401	168 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	FHL1	Q13642	323 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZMYND11	Q15326	602 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ARHGAP11B	Q3KRB8	267 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF718	Q3SXZ3	478 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF678	Q5SXM1	525 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	FAM219B	Q5XKK7	198 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ANKRD26P1	Q6NSI1	321 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF813	Q6ZN06	617 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF66	Q6ZN08	573 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	DPPA2	Q7Z7J5	298 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SNX32	Q86XE0	403 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PTOV1	Q86YD1	416 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	C20orf196	Q8IYI0	205 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MUC20	Q8N307	709 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	NATD1	Q8N6N6	113 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SPERT	Q8NA61	448 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	PAPD5	Q8NDF8	572 aa	Known RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SLC30A7	Q8NEW0	376 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	VPS37A	Q8NEZ2	397 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR1J2	Q8NGS2	313 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MFSD8	Q8NHS3	518 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR5P2	Q8WZ92	322 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR2M2	Q96R28	347 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR7D2	Q96RA2	312 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	TBX15	Q96SF7	602 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	WAC	Q9BTA9	647 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF350	Q9GZX5	532 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MMP28	Q9H239	520 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	LRMDA	Q9H2I8	198 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MRPL46	Q9H2W6	279 aa	Known RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	LZTFL1	Q9NQ48	299 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	POLE3	Q9NRF9	147 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	RLIM	Q9NVW2	624 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	ADPRHL2	Q9NX46	363 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	KIF17	Q9P2E2	1029 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	MIOX	Q9UGB7	285 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	TAGLN3	Q9UI15	199 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	SLC45A2	Q9UMX9	530 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	POFUT2	Q9Y2G5	429 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	CCL27	Q9Y4X3	112 aa		3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	POLR3H	Q9Y535	204 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076	TET2	Q6N021	2002 aa	Predicted RBP	3.87	□□□□□ -1.79
SCFD1-223	ENST00000557076		A0A096LPI6	279 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	IGHV1-69D	A0A0B4J2H0	117 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	CFAP73	A6NFT4	308 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076		A8MT66	165 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	CEACAM18	A8MTB9	384 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	FTCDNL1	E5RQL4	147 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076		E9PQ18	207 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076		H3BQF6	201 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	TMEM178B	H3BS89	294 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	IFNL4	K9M1U5	179 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076		M0R3G1	203 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF500	O60304	480 aa	Predicted RBP	3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	ENTPD5	O75356	428 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	DUS4L	O95620	317 aa	Known RBP	3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	AGR2	O95994	175 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	IGHV1-69	P01742	117 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	KIT	P10721	976 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	MATN1	P21941	496 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	MAGEA12	P43365	314 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	SERPINB8	P50452	374 aa		3.86	□□□□□ -1.79
SCFD1-223	ENST00000557076	KRTAP10-7	P60409	375 aa	Predicted RBP	3.86	□□□□□ -1.79

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