RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 M0R3G1 203 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 ARPC3O15145 178 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 XPNPEP2O43895 674 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 PPP1R3DO95685 299 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 TGFAP01135 160 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 IFNGP01579 166 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 CSF3P09919 207 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 APEHP13798 732 aaKnown RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 CD40P25942 277 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 AQP2P41181 271 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 FABP6P51161 128 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 CDH15P55291 814 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 PMS2P3Q13401 168 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 GGTLC2Q14390 218 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 C3orf33Q6P1S2 294 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 LSRQ86X29 649 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 LRRC75AQ8NAA5 344 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 ZNF540Q8NDQ6 660 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 ATP6V1C2Q8NEY4 427 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 OR5J2Q8NH18 312 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 MOSPD2Q8NHP6 518 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 GGHQ92820 318 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 MYDGFQ969H8 173 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 MUCL1Q96DR8 90 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 LRR1Q96L50 414 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 FOXN4Q96NZ1 517 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 TAPBPLQ9BX59 468 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 FN3KQ9H479 309 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 NRIP3Q9NQ35 241 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 CMC2Q9NRP2 79 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 FKBP14Q9NWM8 211 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 HDGFL3Q9Y3E1 203 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 RPL36Q9Y3U8 105 aaKnown RBP11.04□□□□□ -0.64
PSEN1-219ENST00000556951 IER3IP1Q9Y5U9 82 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
PSEN1-219ENST00000556951 IGHV3-15A0A0B4J1V0 119 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 PLPP3O14495 311 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 FZD7O75084 574 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 OR6A2O95222 327 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 VENTXO95231 258 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 CD14P08571 375 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ATP6V1B1P15313 513 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 PTAFRP25105 342 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 NOS3P29474 1203 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 GRPRP30550 384 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 RPL5P46777 297 aaKnown RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SLC35A2P78381 396 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 RPL18Q07020 188 aaKnown RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ZP4Q12836 540 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SYT14P1Q58G82 188 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ALG10Q5BKT4 473 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SLC35F1Q5T1Q4 408 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SLC22A25Q6T423 547 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 H1FNTQ75WM6 255 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 RFKQ969G6 155 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 TAS2R5Q9NYW4 299 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 CNOT2Q9NZN8 540 aaKnown RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 DNAJC27Q9NZQ0 273 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 H2AFY2Q9P0M6 372 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-219ENST00000556951 ERVK-18Q9QC07 812 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 TRAPPC4Q9Y296 219 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 SNX5Q9Y5X3 404 aa11.03□□□□□ -0.64
PSEN1-219ENST00000556951 GJE1A6NN92 205 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.65
PSEN1-219ENST00000556951 PRODHO43272 600 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 RGS10O43665 173 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 SLC2A10O95528 541 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 TXNDC12O95881 172 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 IMPDH2P12268 514 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 PIPP12273 146 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-219ENST00000556951 HNF1AP20823 631 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 GTF2E2P29084 291 aaKnown RBP11.02□□□□□ -0.65
PSEN1-219ENST00000556951 PDLIM4P50479 330 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 ZNF83P51522 516 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-219ENST00000556951 CTXN1P60606 82 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 ERVK-25P63136 954 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 OR7A5Q15622 319 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 ZNF362Q5T0B9 420 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-219ENST00000556951 AADACL4Q5VUY2 407 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 GPR139Q6DWJ6 353 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 CPOQ8IVL8 374 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 SPARTQ8N0X7 666 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
PSEN1-219ENST00000556951 ARL5BQ96KC2 179 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms