RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 METAP1DQ6UB28 335 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 DCXRQ7Z4W1 244 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 PRSS35Q8N3Z0 413 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 OR9K2Q8NGE7 335 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 THRSPQ92748 146 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 INTS12Q96CB8 462 aaKnown RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 DIRAS2Q96HU8 199 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ADGRG7Q96K78 797 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SRXN1Q9BYN0 137 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 PLA2G3Q9NZ20 509 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ADAM30Q9UKF2 790 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 FABP12A6NFH5 140 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 EIF1AYO14602 144 aaKnown RBP13.07□□□□□ -0.32
VPS33B-205ENST00000556096 TMEM127O75204 238 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 RAF1P04049 648 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 QDPRP09417 244 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 SRMP19623 302 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 ENPP1P22413 925 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 EVX1P49640 407 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 SUCLG1P53597 346 aaKnown RBP13.07□□□□□ -0.32
VPS33B-205ENST00000556096 WDR38Q5JTN6 314 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 IDNKQ5T6J7 187 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 AGAP7PQ5VUJ5 663 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 STEAP3Q658P3 488 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 ZNF676Q8N7Q3 588 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 MDS2Q8NDY4 140 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
VPS33B-205ENST00000556096 TMEM54Q969K7 222 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 AGAP4Q96P64 663 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 SOSTQ9BQB4 213 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 ZNF703Q9H7S9 590 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-205ENST00000556096 GLTPQ9NZD2 209 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 CYB5R1Q9UHQ9 305 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 KLF13Q9Y2Y9 288 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-205ENST00000556096 LRP12Q9Y561 859 aa13.07□□□□□ -0.32
VPS33B-205ENST00000556096 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 A0A1W2PPK0 400 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 ARGFXA6NJG6 315 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 GPR171O14626 319 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 PDCD5O14737 125 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SMAD9O15198 467 aaKnown RBP13.06□□□□□ -0.32
VPS33B-205ENST00000556096 HPGDSO60760 199 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SRSF10O75494 262 aaKnown RBP13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SP1P08047 785 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 POU3F2P20265 443 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-205ENST00000556096 APEX1P27695 318 aaKnown RBP13.06□□□□□ -0.32
VPS33B-205ENST00000556096 OR10A3P58181 314 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 ZNF79Q15937 498 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 TRIM16LQ309B1 348 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 PDSS1Q5T2R2 415 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 CARD17Q5XLA6 110 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SLC25A25Q6KCM7 469 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 FAM131AQ6UXB0 335 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 CATSPERDQ86XM0 798 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 GPR148Q8TDV2 347 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 RNF133Q8WVZ7 376 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 CNTNAP3BQ96NU0 1288 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 DKK4Q9UBT3 224 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 ACACAQ13085 2346 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 NCKAP5O14513 1909 aa13.06□□□□□ -0.32
VPS33B-205ENST00000556096 TRBV5-7A0A0A0MS05 114 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 A0A1W2PPL8 197 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 H0YC42 278 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 NKX2-8O15522 239 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 NME2P1O60361 137 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 OCM2P0CE71 109 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-205ENST00000556096 PRKAR1AP10644 381 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 EPXP11678 715 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 NME2P22392 152 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 DCTDP32321 178 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 CSNK1A1P48729 337 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 MFAP5Q13361 173 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 HYAL4Q2M3T9 481 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 C10orf128Q5T292 105 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 OR7E24Q6IFN5 339 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 RHOUQ7L0Q8 258 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 GDPD1Q8N9F7 314 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 ZIC4Q8N9L1 334 aa13.05□□□□□ -0.32
VPS33B-205ENST00000556096 HAS2Q92819 552 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms