RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 HSD17B13Q7Z5P4 300 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-209ENST00000555609 ADGRE4PQ86SQ3 457 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 NKAIN3Q8N8D7 197 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 OR52N5Q8NH56 324 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 SEH1LQ96EE3 360 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 SLC41A2Q96JW4 573 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 ELF4Q99607 663 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-209ENST00000555609 NUDT9Q9BW91 350 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 CDCP1Q9H5V8 836 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 TMEM138Q9NPI0 162 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 HHLA2Q9UM44 414 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 KCNMB2Q9Y691 235 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 A0A0D9SG52 128 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 LOC390937A0A1W2PQ73 354 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 A8MXK9 166 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 LDLRAD4O15165 306 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 AHSA1O95433 338 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 SPARCP09486 303 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 IGFBP4P22692 258 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 MPZP25189 248 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 ADAM8P78325 824 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 PLCXD2Q0VAA5 305 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 EIF2B1Q14232 305 aaKnown RBP14.55□□□□□ -0.08
TUBB3-209ENST00000555609 MEF2DQ14814 521 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 C4orf46Q504U0 113 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 PHF19Q5T6S3 580 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 TMEM244Q5VVB8 128 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 SLC29A4Q7RTT9 530 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 MARCH3Q86UD3 253 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 C12orf45Q8N5I9 185 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-209ENST00000555609 TGM7Q96PF1 710 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 CDX2Q99626 313 aaPredicted RBP14.55□□□□□ -0.08
TUBB3-209ENST00000555609 ABHD6Q9BV23 337 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 EDEM2Q9BV94 578 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 CHRDQ9H2X0 955 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 COPS7AQ9UBW8 275 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 SLC22A13Q9Y226 551 aa14.55□□□□□ -0.08
TUBB3-209ENST00000555609 TMEM82A0PJX8 343 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 TMEM200CA6NKL6 621 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 A8MUA0 341 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 H3BMH7 237 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 SRSF10O75494 262 aaKnown RBP14.54□□□□□ -0.08
TUBB3-209ENST00000555609 PNPP00491 289 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 CD8AP01732 235 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 NUP62P37198 522 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-209ENST00000555609 GUCA2AQ02747 115 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 PCK2Q16822 640 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 YOD1Q5VVQ6 348 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-209ENST00000555609 OGFOD3Q6PK18 319 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 BIVMQ86UB2 503 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 BPHLQ86WA6 291 aaPredicted RBP14.54□□□□□ -0.08
TUBB3-209ENST00000555609 PDZD9Q8IXQ8 264 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 OR4D10Q8NGI6 311 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 GPR119Q8TDV5 335 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 TMEM234Q8WY98 164 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 SLC25A36Q96CQ1 311 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 GAL3ST4Q96RP7 486 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 WWTR1Q9GZV5 400 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 SLC25A32Q9H2D1 315 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 F5P12259 2224 aa14.54□□□□□ -0.08
TUBB3-209ENST00000555609 FXYD6-FXYD2A0A087WZ82 144 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 SCGNO76038 276 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 KDM4BO94953 1096 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 NUDT14O95848 222 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 GPANK1O95872 356 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 OR4E1P0C645 316 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 UBBP0CG47 229 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 UBCP0CG48 685 aaKnown RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 PTGS2P35354 604 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 RPS27P42677 84 aaKnown RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 DNASE1L1P49184 302 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 ARRB1P49407 418 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 NR0B1P51843 470 aaKnown RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 SLC26A5P58743 744 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 RPS27AP62979 156 aaKnown RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 UBA52P62987 128 aaKnown RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 DLX2Q07687 328 aaPredicted RBP14.53□□□□□ -0.08
TUBB3-209ENST00000555609 ODF4Q2M2E3 257 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 ASPHD2Q6ICH7 369 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 OR7E24Q6IFN5 339 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 C11orf88Q6PI97 169 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 TTLL10Q6ZVT0 673 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 SLC35D2Q76EJ3 337 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 ZNF441Q8N8Z8 693 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 OR5M9Q8NGP3 310 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 OR1N1Q8NGS0 311 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 TSLPQ969D9 159 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 RTN4RQ9BZR6 473 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 FXYD6Q9H0Q3 95 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 SLC2A8Q9NY64 477 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 LRP12Q9Y561 859 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 UNC80Q8N2C7 3258 aa14.53□□□□□ -0.08
TUBB3-209ENST00000555609 DISC1C4P0D8 188 aa14.52□□□□□ -0.08
TUBB3-209ENST00000555609 PRKNO60260 465 aaPredicted RBP14.52□□□□□ -0.08
TUBB3-209ENST00000555609 FADS1O60427 444 aa14.52□□□□□ -0.08
TUBB3-209ENST00000555609 ZNF217O75362 1048 aa14.52□□□□□ -0.08
TUBB3-209ENST00000555609 CYB5AP00167 134 aa14.52□□□□□ -0.08
TUBB3-209ENST00000555609 HOXD4P09016 255 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms