RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ARRDC5A6NEK1 342 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 H3BN98 237 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 DEAF1O75398 565 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 SOX14O95416 240 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 SNAP29O95721 258 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 IFNGP01579 166 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 HLA-DQA2P01906 255 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 LCKP06239 509 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 MMP7P09237 267 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 CCL2P13500 99 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 HIST1H1CP16403 213 aaKnown RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 GLRXP35754 106 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 CDKN2AP42771 156 aaKnown RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 GLO1Q04760 184 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRP54-206ENST00000555317 SWI5Q1ZZU3 235 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 SLC35F1Q5T1Q4 408 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 ZNF770Q6IQ21 691 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 RGS7BPQ6MZT1 257 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 ARL9Q6T311 187 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 CLEC2AQ6UVW9 174 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 SVOPLQ8N434 492 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 SDR9C7Q8NEX9 313 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 OR2T33Q8NG76 320 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 OR10H5Q8NGA6 315 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 OR52E2Q8NGJ4 325 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 AKR7LQ8NHP1 331 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 TEX47Q8TBZ9 253 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 MRPL24Q96A35 216 aaKnown RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 SNX18Q96RF0 628 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 NMNAT3Q96T66 252 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 TSSK6Q9BXA6 273 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 BCL2L14Q9BZR8 327 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 NUAK2Q9H093 628 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 RPRD1BQ9NQG5 326 aaKnown RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 PDP1Q9P0J1 537 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 KIF17Q9P2E2 1029 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 DNAJB9Q9UBS3 223 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 NDRG4Q9ULP0 352 aaKnown RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 BAIAP2Q9UQB8 552 aa10.45□□□□□ -0.74
SRP54-206ENST00000555317 COA3Q9Y2R0 106 aaPredicted RBP10.45□□□□□ -0.74
SRP54-206ENST00000555317 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 CSPG4Q6UVK1 2322 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 TRIM64A6NGJ6 449 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 RIIAD1A6NNX1 92 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 H7C1Q1 480 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
SRP54-206ENST00000555317 SGCEO43556 437 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 GPRIN2O60269 458 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 DOK2O60496 412 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 CSF3P09919 207 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 PCSK6P29122 969 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 PPOXP50336 477 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 EFNA4P52798 201 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 DSCR9P59020 149 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 LSM6P62312 80 aaKnown RBP10.44□□□□□ -0.74
SRP54-206ENST00000555317 PSG4Q00888 419 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 COX10Q12887 443 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 AQP6Q13520 282 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 SLC36A3Q495N2 470 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 ZNF774Q6NX45 483 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 PROKR2Q8NFJ6 384 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 C11orf40Q8WZ69 217 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 FEVQ99581 238 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 SYT3Q9BQG1 590 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 RHNO1Q9BSD3 238 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 RACGAP1Q9H0H5 632 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 SRA1Q9HD15 236 aaKnown RBP10.44□□□□□ -0.74
SRP54-206ENST00000555317 IL20Q9NYY1 176 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 DUSP13Q9UII6 198 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 GPR160Q9UJ42 338 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 KLHL21Q9UJP4 597 aa10.44□□□□□ -0.74
SRP54-206ENST00000555317 NIPBLQ6KC79 2804 aaeCLIP10.44□□□□□ -0.74
SRP54-206ENST00000555317 FAM171A2A8MVW0 826 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 M0R233 179 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 EBAG9O00559 213 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 SYNGR3O43761 229 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 NDUFS7O75251 213 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 INHBBP09529 407 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 ZNF3P17036 446 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 HTR5AP47898 357 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 EVX1P49640 407 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 UCP2P55851 309 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 KLF3P57682 345 aaPredicted RBP10.43□□□□□ -0.74
SRP54-206ENST00000555317 ENDOGQ14249 297 aaKnown RBP10.43□□□□□ -0.74
SRP54-206ENST00000555317 CARTPTQ16568 116 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 NKPD1Q17RQ9 610 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 MST1LQ2TV78 715 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 UGT2A3Q6UWM9 527 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 BIVMQ86UB2 503 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 PAQR4Q8N4S7 273 aaPredicted RBP10.43□□□□□ -0.74
SRP54-206ENST00000555317 ATG16L2Q8NAA4 619 aa10.43□□□□□ -0.74
SRP54-206ENST00000555317 CPEB3Q8NE35 698 aaKnown RBP10.43□□□□□ -0.74
SRP54-206ENST00000555317 OR2T4Q8NH00 348 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms