RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MRPL39Q9NYK5 338 aaKnown RBP15.52■□□□□ 0.07
SHOX-204ENST00000554971 LRRK2Q5S007 2527 aa15.52■□□□□ 0.07
SHOX-204ENST00000554971 IGLV3-32A0A0A0MS00 114 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 EIF4E2O60573 245 aaKnown RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 C1QBP02746 253 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 UQCRC1P31930 480 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 ZNF117Q03924 483 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 SLC25A35Q3KQZ1 300 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 PLCZ1Q86YW0 608 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 PHOSPHO1Q8TCT1 267 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 AKAP1Q92667 903 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHOX-204ENST00000554971 ZNF524Q96C55 264 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 GON7Q9BXV9 100 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 ZDHHC11Q9H8X9 412 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 FKRPQ9H9S5 495 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 MED11Q9P086 117 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 BOKQ9UMX3 212 aaPredicted RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 RBMX2Q9Y388 322 aaKnown RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 ZNF432O94892 652 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 HIST1H2ABP04908 130 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 SRMP19623 302 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 MAPK3P27361 379 aaPredicted RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 NAA10P41227 235 aaPredicted RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 TDGF1P3P51864 188 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 PPIAP62937 165 aaKnown RBP15.51■□□□□ 0.07
SHOX-204ENST00000554971 DYRK1AQ13627 763 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 ALG10Q5BKT4 473 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 LEG1Q6P5S2 330 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 HIST3H2AQ7L7L0 130 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 OR1J4Q8NGS1 313 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 OR2T4Q8NH00 348 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 GRPEL2Q8TAA5 225 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 C15orf40Q8WUR7 153 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 THRSPQ92748 146 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 HIST1H2ACQ93077 130 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 ABHD1Q96SE0 405 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 SLX1AQ9BQ83 275 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 DPAGT1Q9H3H5 408 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 MARCH7Q9H992 704 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 PPP4R1LQ9P1A2 415 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 NUBP2Q9Y5Y2 271 aa15.51■□□□□ 0.07
SHOX-204ENST00000554971 ADGRG4Q8IZF6 3080 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 B8ZZF3 427 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 LRRN3E7EW58 273 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 PHYHO14832 338 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 GMFGO60234 142 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 ATF1P18846 271 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 CENPAP49450 140 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 GZMKP49863 264 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 C17orf67Q0P5P2 114 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 MAB21L1Q13394 359 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 UBE2NLQ5JXB2 153 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 FAM180AQ6UWF9 173 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 OR2M3Q8NG83 312 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 CPT1CQ8TCG5 803 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 ACTR6Q9GZN1 396 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 TMEM14AQ9Y6G1 99 aa15.5■□□□□ 0.07
SHOX-204ENST00000554971 DIDO1Q9BTC0 2240 aaKnown RBP15.5■□□□□ 0.07
SHOX-204ENST00000554971 TEX13CA0A0J9YWL9 993 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 SULT1B1O43704 296 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 AQP2P41181 271 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 CDKN2AP42771 156 aaKnown RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 HCCSP53701 268 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 FOXK1P85037 733 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 PLGLB1Q02325 96 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 TNK1Q13470 666 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 FAM220AQ7Z4H9 259 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 TOMM5Q8N4H5 51 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 C10orf53Q8N6V4 93 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 YIPF7Q8N8F6 280 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 OR6K6Q8NGW6 343 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 MOSPD2Q8NHP6 518 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 SMAP2Q8WU79 429 aaPredicted RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 DMRTB1Q96MA1 342 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 FYTTD1Q96QD9 318 aaKnown RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 BRD7Q9NPI1 651 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 ACOXLQ9NUZ1 547 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 GRHPRQ9UBQ7 328 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 COPS3Q9UNS2 423 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 LIPGQ9Y5X9 500 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 BLOC1S5-TXNDC5H3BN57 136 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 AIPO00170 330 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 ARHGEF9O43307 516 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 EEF1E1O43324 174 aaKnown RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 HCRTR2O43614 444 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 CDC40O60508 579 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHOX-204ENST00000554971 SELENOFO60613 162 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 WISP1O95388 367 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 PAHP00439 452 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 SCAND1P57086 179 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 CTXN1P60606 82 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 CD83Q01151 205 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 FAPQ12884 760 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 MADCAM1Q13477 382 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 SLC36A2Q495M3 483 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 LSRQ86X29 649 aaPredicted RBP15.49■□□□□ 0.07
SHOX-204ENST00000554971 RFLNBQ8N5W9 214 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 OR51L1Q8NGJ5 315 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 ZFAND1Q8TCF1 268 aa15.49■□□□□ 0.07
SHOX-204ENST00000554971 RASD2Q96D21 266 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms