RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 BTNL8Q6UX41 500 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 RAB42Q8N4Z0 105 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CD180Q99467 661 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CDCA3Q99618 268 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-203ENST00000554873 FKRPQ9H9S5 495 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF443Q9Y2A4 671 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-203ENST00000554873 OR1A2Q9Y585 309 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CSAG2Q9Y5P2 127 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 TRBV6-7A0A0A0MS04 114 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 RIIAD1A6NNX1 92 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 ADAM10O14672 748 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 PSMB6P28072 239 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CRABP1P29762 137 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 SLC6A9P48067 706 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 RHEBQ15382 184 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 TOMM20Q15388 145 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 NR0B2Q15466 257 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 NPSR1Q6W5P4 371 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 NRROSQ86YC3 692 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 AVL9Q8NBF6 648 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CDS1Q92903 461 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 RSPRY1Q96DX4 576 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 MYADMQ96S97 322 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 PRSS27Q9BQR3 290 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 APOBEC3BQ9UH17 382 aaKnown RBP14.17□□□□□ -0.14
SYNE3-203ENST00000554873 GNG8Q9UK08 70 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CENPVL1A0A0U1RR11 272 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 TVP23AA6NH52 213 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 OTOL1A6NHN0 477 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 PRICKLE3O43900 615 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 MED6O75586 246 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 RAB3DO95716 219 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 AK1P00568 194 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 MAKP20794 623 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 PRSS3P35030 304 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ADPRHP54922 357 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 SCAND1P57086 179 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 TAS2R19P59542 299 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 CEBPEQ15744 281 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ANKRD16Q6P6B7 361 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 HEPN1Q6WQI6 88 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 STAC2Q6ZMT1 411 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF836Q6ZNA1 936 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 HHIPL1Q96JK4 782 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 SLC17A9Q9BYT1 436 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 MTHFD2LQ9H903 347 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 MBNL1Q9NR56 388 aaKnown RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF281Q9Y2X9 895 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 BRINP1O60477 761 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 HKR1P10072 659 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ACRP10323 421 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 CD1CP29017 333 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF136P52737 540 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ACTBP60709 375 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ACTG1P63261 375 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 PLA2G7Q13093 441 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 AMZ1Q400G9 498 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 TMEM205Q6UW68 189 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 WDR88Q6ZMY6 472 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 PPP1R3BQ86XI6 285 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 OR7G2Q8NG99 324 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 OR1J1Q8NGS3 322 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 RGP1Q92546 391 aaPredicted RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 PTGES2Q9H7Z7 377 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 C20orf141Q9NUB4 165 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 SIDT1Q9NXL6 827 aaKnown RBP14.16□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF780BQ9Y6R6 833 aa14.16□□□□□ -0.14
SYNE3-203ENST00000554873 RPL36A-HNRNPH2H7BZ11 118 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 OR2T7P0C7T2 308 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 CSF2RAP15509 400 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ST6GAL1P15907 406 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 VIPR2P41587 438 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 CRMP1Q14194 572 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 EIF5AL1Q6IS14 154 aaKnown RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF585AQ6P3V2 769 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 HIST2H3AQ71DI3 136 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 CARFQ8N187 725 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 MRPL43Q8N983 215 aaKnown RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 OR2T27Q8NH04 317 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 PFN4Q8NHR9 129 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ASB17Q8WXJ9 295 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 SMOC1Q9H4F8 434 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 KCNK6Q9Y257 313 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 A0A1W2PPE2 198 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF726A6NNF4 738 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 CRHP06850 196 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 G0S2P27469 103 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 PSMB10P40306 273 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 PPICP45877 212 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 RPS10P46783 165 aaKnown RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 RAB1AP62820 205 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 EIF5AP63241 154 aaKnown RBP14.15□□□□□ -0.14
SYNE3-203ENST00000554873 SPNS3Q6ZMD2 512 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 LYG2Q86SG7 212 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 ACBD4Q8NC06 268 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 OR2L8Q8NGY9 312 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 COL26A1Q96A83 441 aa14.15□□□□□ -0.14
SYNE3-203ENST00000554873 C20orf24Q9BUV8 137 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms