RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZNF658BQ4V348 819 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ANKRD22Q5VYY1 191 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 OR52W1Q6IF63 320 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CERS6Q6ZMG9 384 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 TMCO2Q7Z6W1 182 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CAMK2N1Q7Z7J9 78 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CMC1Q7Z7K0 106 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 SCD5Q86SK9 330 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 MDS2Q8NDY4 140 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 DUSP18Q8NEJ0 188 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 OR52E5Q8NH55 327 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 MARCH1Q8TCQ1 289 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 BLOC1S5Q8TDH9 187 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 LRRC29Q8WV35 223 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 TSEN15Q8WW01 171 aaKnown RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 GIMAP1Q8WWP7 306 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 KIAA1143Q96AT1 154 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 DYNLL2Q96FJ2 89 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF799Q96GE5 643 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 UCK2Q9BZX2 261 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ACTR3CQ9C0K3 210 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ELOVL6Q9H5J4 265 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 AUNIPQ9H7T9 357 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ACP6Q9NPH0 428 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CCDC59Q9P031 241 aaKnown RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 SHPKQ9UHJ6 478 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 PSME2Q9UL46 239 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 WSB1Q9Y6I7 421 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 MTCL1Q9Y4B5 1905 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 AKNAQ7Z591 1439 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 IGLV1-36A0A0B4J1U3 117 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TRAV39A0A0B4J263 110 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 NKX2-6A6NCS4 301 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 H0YHG0 523 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SMKR1H3BMG3 65 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 L7N2F9 121 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 NDUFAB1O14561 156 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 ICOSLGO75144 302 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 RDH16O75452 317 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 FLOT1O75955 427 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 GABARAPO95166 117 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SERPINE2P07093 398 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 UBTFL6P0CB48 400 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SMIM10L1P0DMW3 83 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR5H8P0DN80 308 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 CSNK2A2P19784 350 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 CCT6AP40227 531 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 NBL1P41271 181 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR1G1P47890 313 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 CYB561P49447 251 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 UBE2AP49459 152 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 RAB7AP51149 207 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 RAB9AP51151 201 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF138P52744 262 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SP4Q02446 784 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 PRPSAP1Q14558 356 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF266Q14584 549 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TRAM2Q15035 370 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SF3A2Q15428 464 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 RGNQ15493 299 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR7A5Q15622 319 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SNRNP35Q16560 246 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 HSDL1Q3SXM5 330 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 HES5Q5TA89 166 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 PLET1Q6UQ28 207 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 LYPD2Q6UXB3 125 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TEX43Q6ZNM6 134 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SSX9Q7RTT3 188 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TTC29Q8NA56 475 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR56A4Q8NGH8 313 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR9G4Q8NGQ1 327 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 OR10J6PQ8NGY7 276 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 ZFP90Q8TF47 636 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 CA5BP1Q8WTZ4 195 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 C8orf44Q96CB5 159 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 SMIM10Q96HG1 83 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 WFIKKN1Q96NZ8 548 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 XPO6Q96QU8 1125 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 IQCGQ9H095 443 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TMEM165Q9HC07 324 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 LYRM4Q9HD34 91 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 PXMP2Q9NR77 195 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 MRPL22Q9NWU5 206 aaKnown RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 RBAKQ9NYW8 714 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-213ENST00000554776 MTCH1Q9NZJ7 389 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 CD84Q9UIB8 345 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 PSG8Q9UQ74 426 aa2.01□□□□□ -2.09
SCFD1-213ENST00000554776 TRAV25A0A0B4J276 109 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 KBTBD11-OT1A0A1B0GTJ5 212 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 K7EMT4 169 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 FCN3O75636 299 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ARG1P05089 322 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 PLEKP08567 350 aaPredicted RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 CLTAP09496 248 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ZDHHC11BP0C7U3 371 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 UBCP0CG48 685 aaKnown RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 GZMAP12544 262 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 MAGEA1P43355 309 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 MRPL19P49406 292 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms