RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ERVK-25P63136 954 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 CCNIQ14094 377 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 CHRFAM7AQ494W8 412 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 IQCCQ4KMZ1 466 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 PABPC1L2AQ5JQF8 200 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 GPR139Q6DWJ6 353 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 PODNL1Q6PEZ8 512 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 UGT2A3Q6UWM9 527 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 FOXL2NBQ6ZUU3 175 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 IGFN1Q86VF2 1251 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 LRP11Q86VZ4 500 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 MEX3DQ86XN8 651 aaKnown RBP7.49□□□□□ -1.21
ACTN1-213ENST00000554508 PAQR4Q8N4S7 273 aaPredicted RBP7.49□□□□□ -1.21
ACTN1-213ENST00000554508 CPEB3Q8NE35 698 aaKnown RBP7.49□□□□□ -1.21
ACTN1-213ENST00000554508 OR13C2Q8NGS9 318 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 SYNPRQ8TBG9 265 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 NSMAFQ92636 917 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 FAM46AQ96IP4 442 aaKnown RBP7.49□□□□□ -1.21
ACTN1-213ENST00000554508 DHRS1Q96LJ7 313 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 TSPAN32Q96QS1 320 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 CHID1Q9BWS9 393 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 YY1AP1Q9H869 796 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 SLCO1C1Q9NYB5 712 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 EIF3KQ9UBQ5 218 aaKnown RBP7.49□□□□□ -1.21
ACTN1-213ENST00000554508 LPAR3Q9UBY5 353 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 CDC42EP3Q9UKI2 254 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 TMCC3Q9ULS5 477 aa7.49□□□□□ -1.21
ACTN1-213ENST00000554508 IGLV3-9A0A075B6K5 115 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 IGHV4-61A0A0C4DH41 118 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 TRBV4-1A0A0J9YWV2 114 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 A0A1W2PPL8 197 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 A0A1W2PPW3 197 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 PRSS37A4D1T9 235 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 C12orf71A8MTZ7 269 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ANKRD65E5RJM6 399 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 LMX1BO60663 402 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 FKBP6O75344 327 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 CST1P01037 141 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 TACSTD2P09758 323 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 HOXB6P17509 224 aaKnown RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 MSR1P21757 451 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 CCNOP22674 350 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 LAP3P28838 519 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ALDH3B1P43353 468 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 MAGEA2P43356 314 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 OMPP47874 163 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 LIMS1P48059 325 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 GDI2P50395 445 aaKnown RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 CHN2P52757 468 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 KLF3P57682 345 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 MRPS11P82912 194 aaKnown RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 PSG4Q00888 419 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 RIN1Q13671 783 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 KPNB1Q14974 876 aaKnown RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 NKPD1Q17RQ9 610 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ZNF718Q3SXZ3 478 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 DPY19L2P2Q6ZN68 376 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 FAM122BQ7Z309 247 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 CLDN22Q8N7P3 220 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 OR1J1Q8NGS3 322 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 SNX33Q8WV41 574 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 RDH5Q92781 318 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 HPS1Q92902 700 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 POM121L2Q96KW2 1035 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 Q96M85 177 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ZNF570Q96NI8 536 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 GPX7Q96SL4 187 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 OR2H1Q9GZK4 316 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 BPESC1Q9GZL8 116 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 TPK1Q9H3S4 243 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 REEP1Q9H902 201 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 CHODLQ9H9P2 273 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ELOVL3Q9HB03 270 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 NRIP3Q9NQ35 241 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 TAAR3PQ9P1P4 343 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
ACTN1-213ENST00000554508 FZR1Q9UM11 496 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 SIGLEC7Q9Y286 467 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 ADAM18Q9Y3Q7 739 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 U3KQV3 271 aa7.48□□□□□ -1.21
ACTN1-213ENST00000554508 LOC100509620A0A075B734 347 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 TEX13CA0A0J9YWL9 993 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 LOC100289279A0A1B0GTE1 492 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 C5orf49A4QMS7 147 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 UNC119BA6NIH7 251 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 C17orf100A8MU93 164 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 KIAA1324LA8MWY0 1029 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-213ENST00000554508 H3BSA7 217 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 TNFRSF11BO00300 401 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 ICMTO60725 284 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 LILRA1O75019 489 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 TIPRLO75663 272 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 KRT36O76013 467 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 CLPTM1O96005 669 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 IGHV3-13P01766 116 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 HPXP02790 462 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 MT-ND5P03915 603 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 FAM157CP0CG43 387 aa7.47□□□□□ -1.21
ACTN1-213ENST00000554508 COX5BP10606 129 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms