RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CSPG4Q6UVK1 2322 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 LOC100509620A0A075B734 347 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 TCRBV3S1A0A5B6 114 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 RNF223E7ERA6 249 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 DCTN6O00399 190 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 BHLHE40O14503 412 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 F12P00748 615 aaPredicted RBP17.52■□□□□ 0.4
FOXA1-203ENST00000553751 CST1P01037 141 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 IGFBP1P08833 259 aaPredicted RBP17.52■□□□□ 0.4
FOXA1-203ENST00000553751 HOXB6P17509 224 aaKnown RBP17.52■□□□□ 0.4
FOXA1-203ENST00000553751 PCSK6P29122 969 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 EVX1P49640 407 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 GK3PQ14409 553 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 CLEC12AQ5QGZ9 265 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 ZNF774Q6NX45 483 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 RASSF6Q6ZTQ3 369 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 SYT9Q86SS6 491 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 JAZF1Q86VZ6 243 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 SPATA24Q86W54 205 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 GLB1L2Q8IW92 636 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 OR8D4Q8NGM9 314 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 OR4K13Q8NH42 304 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 VRK1Q99986 396 aaPredicted RBP17.52■□□□□ 0.4
FOXA1-203ENST00000553751 SYT3Q9BQG1 590 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 WACQ9BTA9 647 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 LRMDAQ9H2I8 198 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 OR51B6Q9H340 312 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 IL20Q9NYY1 176 aa17.52■□□□□ 0.4
FOXA1-203ENST00000553751 IGHV4-30-2A0A087WSY4 118 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 IGLV1-36A0A0B4J1U3 117 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 IDH3BO43837 385 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 MPZL1O95297 269 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 GAAP10253 952 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 NOS3P29474 1203 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 ERVS71-1P61550 626 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 DBPQ10586 325 aaPredicted RBP17.51■□□□□ 0.39
FOXA1-203ENST00000553751 OTPQ5XKR4 325 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 CLEC2AQ6UVW9 174 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 LRP11Q86VZ4 500 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 OR10H5Q8NGA6 315 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 OR10G2Q8NGC3 310 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 OR52L1Q8NGH7 329 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 REG4Q9BYZ8 158 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 DYNLRB1Q9NP97 96 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 MYEF2Q9P2K5 600 aaKnown RBP17.51■□□□□ 0.39
FOXA1-203ENST00000553751 FZR1Q9UM11 496 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 FKBP7Q9Y680 259 aa17.51■□□□□ 0.39
FOXA1-203ENST00000553751 C5orf49A4QMS7 147 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 GPANK1O95872 356 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 RENP00797 406 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 CCNOP22674 350 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 CRABP1P29762 137 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 WNT5AP41221 380 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 GDI2P50395 445 aaKnown RBP17.5■□□□□ 0.39
FOXA1-203ENST00000553751 UCP2P55851 309 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 DSCR9P59020 149 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 AQP6Q13520 282 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 KCNMB1Q16558 191 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 RGS7BPQ6MZT1 257 aaPredicted RBP17.5■□□□□ 0.39
FOXA1-203ENST00000553751 DNM1P34Q6PK57 102 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 CLEC9AQ6UXN8 241 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 ALDH16A1Q8IZ83 802 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 ZNF101Q8IZC7 436 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 OR6V1Q8N148 313 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 ZCCHC24Q8N2G6 241 aaKnown RBP17.5■□□□□ 0.39
FOXA1-203ENST00000553751 SDR9C7Q8NEX9 313 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 BCL2L14Q9BZR8 327 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 RACGAP1Q9H0H5 632 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 B9D1Q9UPM9 204 aa17.5■□□□□ 0.39
FOXA1-203ENST00000553751 A0A096LNT2 108 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 OR6C68A6NDL8 312 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ARRDC5A6NEK1 342 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 FAM171A2A8MVW0 826 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ICMTO60725 284 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 FKBP6O75344 327 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ATP5HO75947 161 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 LY6G6DO95868 133 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 TP53P04637 393 aaPredicted RBP17.49■□□□□ 0.39
FOXA1-203ENST00000553751 GSTM3P21266 225 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 RAD52P43351 418 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ERFP50548 548 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 RASSF2P50749 326 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 LSM6P62312 80 aaKnown RBP17.49■□□□□ 0.39
FOXA1-203ENST00000553751 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.49■□□□□ 0.39
FOXA1-203ENST00000553751 SCRN3Q0VDG4 424 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 SLC35F1Q5T1Q4 408 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 TMEM179BQ7Z7N9 219 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ZBTB46Q86UZ6 589 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 MAPK1IP1LQ8NDC0 245 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 PAPD5Q8NDF8 572 aaKnown RBP17.49■□□□□ 0.39
FOXA1-203ENST00000553751 OR52E2Q8NGJ4 325 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 C11orf40Q8WZ69 217 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 SLCO4A1Q96BD0 722 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 NIPSNAP1Q9BPW8 284 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 RHNO1Q9BSD3 238 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 RAB1BQ9H0U4 201 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 FN3KQ9H479 309 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 RPRD1BQ9NQG5 326 aaKnown RBP17.49■□□□□ 0.39
FOXA1-203ENST00000553751 TBC1D23Q9NUY8 699 aa17.49■□□□□ 0.39
FOXA1-203ENST00000553751 ASH2LQ9UBL3 628 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms