RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SIAEQ9HAT2 523 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 SMURF2Q9HAU4 748 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 NRIP3Q9NQ35 241 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 KRT84Q9NSB2 600 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 IL20Q9NYY1 176 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 UGT2A1Q9Y4X1 527 aa20.38■□□□□ 0.85
TDP1-205ENST00000553527 A0A1W2PPL8 197 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 FAM171A2A8MVW0 826 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 H3BN98 237 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 GPRIN2O60269 458 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 ANPEPP15144 967 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 GUCA1AP43080 201 aaPredicted RBP20.37■□□□□ 0.85
TDP1-205ENST00000553527 DAPP51397 102 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 PLP2Q04941 152 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 SLC36A3Q495N2 470 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 GPR139Q6DWJ6 353 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 CLEC2AQ6UVW9 174 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 SLC30A7Q8NEW0 376 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 OR8D4Q8NGM9 314 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 TEX47Q8TBZ9 253 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 SORCS2Q96PQ0 1159 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 CCNB1IP1Q9NPC3 277 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 REV1Q9UBZ9 1251 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 FBXL3Q9UKT7 428 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 CMAHPQ9Y471 501 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 IER3IP1Q9Y5U9 82 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 C2CD3Q4AC94 2353 aa20.37■□□□□ 0.85
TDP1-205ENST00000553527 CHD3Q12873 2000 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 TEX13CA0A0J9YWL9 993 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 XKRYO14609 159 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 IGFBP1P08833 259 aaPredicted RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 OSMP13725 252 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 APEHP13798 732 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 SDHAP31040 664 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 EFNA4P52798 201 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 MRPS34P82930 218 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 HSF2Q03933 536 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 KRR1Q13601 381 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 EFNB3Q15768 340 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 FAM122BQ7Z309 247 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 DPPA2Q7Z7J5 298 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 ZCCHC24Q8N2G6 241 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 RASD2Q96D21 266 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 ERMAPQ96PL5 475 aaPredicted RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 RBM4BQ9BQ04 359 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 RBM4Q9BWF3 364 aaKnown RBP20.36■□□□□ 0.85
TDP1-205ENST00000553527 TSSK6Q9BXA6 273 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 OSBPL10Q9BXB5 764 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 RERGLQ9H628 205 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 FZR1Q9UM11 496 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 ZFHX3Q15911 3703 aa20.36■□□□□ 0.85
TDP1-205ENST00000553527 IGHV4-30-2A0A087WSY4 118 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 IQCMA0A1B0GVH7 501 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 F12P00748 615 aaPredicted RBP20.35■□□□□ 0.85
TDP1-205ENST00000553527 TP53P04637 393 aaPredicted RBP20.35■□□□□ 0.85
TDP1-205ENST00000553527 FAM157BP0CG42 384 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 CCNOP22674 350 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 IGFBP5P24593 272 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 POU1F1P28069 291 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 LAP3P28838 519 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 NRN1LQ496H8 165 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 MESTQ5EB52 335 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 DNM1P46Q6ZS02 220 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 FNDC8Q8TC99 324 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 NABP1Q96AH0 204 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 EME1Q96AY2 570 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 FOXN4Q96NZ1 517 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 C9orf16Q9BUW7 83 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 DCLRE1BQ9H816 532 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 CDH20Q9HBT6 801 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 ZANQ9Y493 2812 aa20.35■□□□□ 0.85
TDP1-205ENST00000553527 TMEM129A0AVI4 362 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 SOCS2O14508 198 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 PTHP01270 115 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 HEXAP06865 529 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 ZNF32P17041 273 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 APEX1P27695 318 aaKnown RBP20.34■□□□□ 0.85
TDP1-205ENST00000553527 NOS3P29474 1203 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 PPP2R2BQ00005 443 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 CARTPTQ16568 116 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 PABPC1L2AQ5JQF8 200 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 KDM4DQ6B0I6 523 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 PARP8Q8N3A8 854 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 PAQR4Q8N4S7 273 aaPredicted RBP20.34■□□□□ 0.85
TDP1-205ENST00000553527 OR2T33Q8NG76 320 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 FAM168AQ92567 244 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 DOK1Q99704 481 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 SYT3Q9BQG1 590 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 DYNLRB1Q9NP97 96 aa20.34■□□□□ 0.85
TDP1-205ENST00000553527 SLC22A23A1A5C7 686 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 BHLHE40O14503 412 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 EI24O14681 340 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 IMPA2O14732 288 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 ARPC3O15145 178 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 TXNDC12O95881 172 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 MMP7P09237 267 aaPredicted RBP20.33■□□□□ 0.85
TDP1-205ENST00000553527 APLNRP35414 380 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 GLRXP35754 106 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 TRIP10Q15642 601 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 MSMPQ1L6U9 139 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms