RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OR7A5Q15622 319 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 PTPN20Q4JDL3 420 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 HES5Q5TA89 166 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 OR10G4Q8NGN3 311 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 LYPD6BQ8NI32 183 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CREB3L1Q96BA8 519 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 NOX3Q9HBY0 568 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 RETNQ9HD89 108 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CCDC59Q9P031 241 aaKnown RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF223Q9UK11 482 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 KCNE3Q9Y6H6 103 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 WDR19Q8NEZ3 1342 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 IGLV1-36A0A0B4J1U3 117 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 INS-IGF2F8WCM5 200 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 K7EMT4 169 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 FKBP6O75344 327 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 OR5H8P0DN80 308 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 CCNB1P14635 433 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 NAMPTP43490 491 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 RPS5P46782 204 aaKnown RBP3.23□□□□□ -1.89
SYNE2-210ENST00000553455 EIF3EP60228 445 aaKnown RBP3.23□□□□□ -1.89
SYNE2-210ENST00000553455 STXBP1P61764 594 aaKnown RBP3.23□□□□□ -1.89
SYNE2-210ENST00000553455 SP4Q02446 784 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 MAB21L1Q13394 359 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 IL18Q14116 193 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 GGTLC2Q14390 218 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 ITIH4Q14624 930 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 PGGHGQ32M88 737 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 DNAJC24Q6P3W2 148 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 MBOAT1Q6ZNC8 495 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 SSX9Q7RTT3 188 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 CMC1Q7Z7K0 106 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 TMEM150AQ86TG1 271 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 C15orf56Q8N910 161 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 XPO6Q96QU8 1125 aaKnown RBP3.23□□□□□ -1.89
SYNE2-210ENST00000553455 TEKT3Q9BXF9 490 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 SLC17A9Q9BYT1 436 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 PLA2G2FQ9BZM2 168 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 LHX9Q9NQ69 397 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 C20orf96Q9NUD7 363 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-210ENST00000553455 TBX21Q9UL17 535 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 TBC1D24Q9ULP9 559 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 CAMTA1Q9Y6Y1 1673 aa3.23□□□□□ -1.89
SYNE2-210ENST00000553455 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 KBTBD11-OT1A0A1B0GTJ5 212 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 A0A1B0GW55 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 LYRM9A8MSI8 78 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 ANKRD63C9JTQ0 380 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 ANGPTL7O43827 346 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4L2P0CJ85 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4L3P0CJ86 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4L5P0CJ88 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4L6P0CJ89 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4L7P0CJ90 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CT45A6P0DMU7 189 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CT45A5P0DMU8 189 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CT45A7P0DMV0 189 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 PRPS2P11908 318 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF823P16415 610 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 EIF2S2P20042 333 aaKnown RBP3.22□□□□□ -1.89
SYNE2-210ENST00000553455 OR1E1P30953 314 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 PPOXP50336 477 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 TRAM2Q15035 370 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CT45A1Q5HYN5 189 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 OR52W1Q6IF63 320 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 FBXW12Q6X9E4 464 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 FAM92BQ6ZTR7 304 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 LINC01551Q86U37 167 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 FAM86B1Q8N7N1 296 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 BPIFCQ8NFQ6 507 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 OR5K2Q8NHB8 316 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CT45A3Q8NHU0 189 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 AGR3Q8TD06 166 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 SEH1LQ96EE3 360 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 BMFQ96LC9 184 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 ACTR3CQ9C0K3 210 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-210ENST00000553455 NTN4Q9HB63 628 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 MRPS30Q9NP92 439 aaKnown RBP3.22□□□□□ -1.89
SYNE2-210ENST00000553455 ISYNA1Q9NPH2 558 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 DUX4Q9UBX2 424 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CLN8Q9UBY8 286 aa3.22□□□□□ -1.89
SYNE2-210ENST00000553455 CAB39Q9Y376 341 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-210ENST00000553455 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 TRAV25A0A0B4J276 109 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 IGHV5-51A0A0C4DH38 117 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 CASQ2O14958 399 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 SNAI2O43623 268 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 AQP8O94778 261 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 F2RP25116 425 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 CEACAM6P40199 344 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 PON2Q15165 354 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 XKR4Q5GH76 650 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 TWF2Q6IBS0 349 aaKnown RBP3.21□□□□□ -1.9
SYNE2-210ENST00000553455 TTC23LQ6PF05 361 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 ZFP2Q6ZN57 461 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 KATNAL2Q8IYT4 538 aa3.21□□□□□ -1.9
SYNE2-210ENST00000553455 NOXO1Q8NFA2 376 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms