RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 XPO4Q9C0E2 1151 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 GOLPH3Q9H4A6 298 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TRIM45Q9H8W5 580 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ZDHHC11Q9H8X9 412 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 VPS37BQ9H9H4 285 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 LRTM1Q9HBL6 345 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ADGRL4Q9HBW9 690 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 MRPS30Q9NP92 439 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TIGARQ9NQ88 270 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 PNO1Q9NRX1 252 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 EIF3LQ9Y262 564 aaKnown RBP3.23□□□□□ -1.89
ATXN3-217ENST00000553287 ATP6V1DQ9Y5K8 247 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 DYSFO75923 2080 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 HEATR5BQ9P2D3 2071 aa3.23□□□□□ -1.89
ATXN3-217ENST00000553287 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 C15orf38-AP3S2A0A0A6YYH1 394 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 A0A0G2JN53 185 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SAGE2PA6NJ88 616 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 C4orf51C9J302 202 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 GOLGA8KD6RF30 607 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 GOLGA8TH3BQL2 631 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 BCKDKO14874 412 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 CASKO14936 926 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 CHST10O43529 356 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 CD5LO43866 347 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 CST8O60676 142 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 VPS26AO75436 327 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 PROSCO94903 275 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 NUDT14O95848 222 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 GAS8O95995 478 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 FTH1P02794 183 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SERPIND1P05546 499 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 OR56A5P0C7T3 313 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SLC35E2P0CK97 266 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 GZMAP12544 262 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 B4GALT1P15291 398 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 MSNP26038 577 aaKnown RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 FOXN2P32314 431 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 RPA3P35244 121 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 MARCKSL1P49006 195 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SSR4P51571 173 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 HNRNPFP52597 415 aaKnown RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 DEFA6Q01524 100 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 KCNJ11Q14654 390 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SLC10A1Q14973 349 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 TRADDQ15628 312 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 DEFB134Q4QY38 66 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 DNAJC21Q5F1R6 531 aaKnown RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 DDI2Q5TDH0 399 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 C2orf66Q6UXQ4 117 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 MBOAT1Q6ZNC8 495 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 KIAA1328Q86T90 577 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 SLC22A16Q86VW1 577 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 APCDD1LQ8NCL9 501 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 OR4L1Q8NH43 312 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 UBTD2Q8WUN7 234 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 PANX3Q96QZ0 392 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 TBL1YQ9BQ87 522 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 BEX2Q9BXY8 128 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 HSD3B7Q9H2F3 369 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 NLE1Q9NVX2 485 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 HPF1Q9NWY4 346 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 PRODH2Q9UF12 536 aa3.22□□□□□ -1.89
ATXN3-217ENST00000553287 MTRF1LQ9UGC7 380 aaKnown RBP3.22□□□□□ -1.89
ATXN3-217ENST00000553287 USF3Q68DE3 2245 aa3.21□□□□□ -1.89
ATXN3-217ENST00000553287 MACROD2A1Z1Q3 448 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 H7C0C1 242 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 TSPAN2O60636 221 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 NIPSNAP2O75323 286 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 NSA2O95478 260 aaKnown RBP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 EPPINO95925 133 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 CHRNGP07510 517 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 TPM2P07951 284 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 NUDT17P0C025 328 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 SBK2P0C263 348 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 LAMP1P11279 417 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 CNR1P21554 472 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 LOXP28300 417 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 GRIA1P42261 906 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 CDKN2BP42772 138 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ATP5OP48047 213 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 GEMP55040 296 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 RAB8AP61006 207 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 SRYQ05066 204 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 PRDX1Q06830 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-217ENST00000553287 NDUFA9Q16795 377 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 FBXL19-AS1Q494R0 122 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ACSBG2Q5FVE4 666 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 C6orf52Q5T4I8 152 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF740Q8NDX6 193 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 PLPP5Q8NEB5 264 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 OR52K1Q8NGK4 314 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 ASZ1Q8WWH4 475 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 RAD51AP1Q96B01 352 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 CXorf58Q96LI9 332 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 MAGEB18Q96M61 343 aa3.21□□□□□ -1.9
ATXN3-217ENST00000553287 NAP1L5Q96NT1 182 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms