RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 BPIFB3P59826 476 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 ABCE1P61221 599 aaKnown RBP10.72□□□□□ -0.69
VPS29-211ENST00000553128 FMODQ06828 376 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 EGR3Q06889 387 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 LRRC74AQ0VAA2 488 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 DBPQ10586 325 aaPredicted RBP10.72□□□□□ -0.69
VPS29-211ENST00000553128 RGNQ15493 299 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 ZNF74Q16587 644 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 DHRS4L2Q6PKH6 230 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 ZNF841Q6ZN19 808 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 NOXO1Q8NFA2 376 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 TBC1D15Q8TC07 691 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 C4orf45Q96LM5 186 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 C16orf45Q96MC5 204 aaPredicted RBP10.72□□□□□ -0.69
VPS29-211ENST00000553128 SEPHS2Q99611 448 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 C16orf95Q9H693 158 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 PPCSQ9HAB8 311 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 MEAF6Q9HAF1 191 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 SIAEQ9HAT2 523 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 TMEM27Q9HBJ8 222 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 PNPOQ9NVS9 261 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 SELENONQ9NZV5 590 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 MIOXQ9UGB7 285 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
VPS29-211ENST00000553128 ZNF816-ZNF321PA0A0X1KG74 233 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 LOC100653049A0A140TA62 436 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 H3BSA7 217 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 KPNA4O00629 521 aaPredicted RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 SDHDO14521 159 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 TRMUO75648 421 aaKnown RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 KRT34O76011 436 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 ANP32DO95626 131 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 THY1P04216 161 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 ETS2P15036 469 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 TNFSF4P23510 183 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 RPL14P50914 215 aaKnown RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 ZNF133P52736 654 aaPredicted RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 RGS8P57771 180 aaPredicted RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 NCALDP61601 193 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 MRPS34P82930 218 aaKnown RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 HOXA4Q00056 320 aaPredicted RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 TAF11Q15544 211 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 SGCAQ16586 387 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 C10orf128Q5T292 105 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 WDR25Q64LD2 544 aaPredicted RBP10.71□□□□□ -0.69
VPS29-211ENST00000553128 NUDCD3Q8IVD9 361 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 MNS1Q8NEH6 495 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 NFKBIDQ8NI38 313 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 NSMAFQ92636 917 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 ITPKCQ96DU7 683 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 ZNF607Q96SK3 696 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 OR2H1Q9GZK4 316 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 ACOXLQ9NUZ1 547 aa10.71□□□□□ -0.69
VPS29-211ENST00000553128 SACSQ9NZJ4 4579 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 C5orf58C9J3I9 102 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 LYPD3O95274 346 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 F13BP05160 661 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 BMP2P12643 396 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 KITLGP21583 273 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 PMELP40967 661 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 ZNF404Q494X3 552 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 TTMPQ5BVD1 217 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 CCBE1Q6UXH8 406 aaPredicted RBP10.7□□□□□ -0.7
VPS29-211ENST00000553128 UNQ6126/PRO20091Q6UXV3 157 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 TSPYL5Q86VY4 417 aaPredicted RBP10.7□□□□□ -0.7
VPS29-211ENST00000553128 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 C19orf18Q8NEA5 215 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 OR10AD1Q8NGE0 317 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 OR8B3Q8NGG8 313 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 ASB10Q8WXI3 467 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 GATAD2BQ8WXI9 593 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 NMD3Q96D46 503 aaKnown RBP10.7□□□□□ -0.7
VPS29-211ENST00000553128 CMBLQ96DG6 245 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 PLEKHA8Q96JA3 519 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 OR8B2Q96RD0 313 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 ZBTB18Q99592 522 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 RASSF4Q9H2L5 321 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 KCNN2Q9H2S1 579 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 TOR3AQ9H497 397 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 WDR55Q9H6Y2 383 aaPredicted RBP10.7□□□□□ -0.7
VPS29-211ENST00000553128 NANSQ9NR45 359 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 MAN2C1Q9NTJ4 1040 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 THUMPD1Q9NXG2 353 aaKnown RBP10.7□□□□□ -0.7
VPS29-211ENST00000553128 CLN8Q9UBY8 286 aa10.7□□□□□ -0.7
VPS29-211ENST00000553128 BLOC1S5-TXNDC5H3BN57 136 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 M0R3H8 397 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 TYROBPO43914 113 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 TOX4O94842 621 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 SERPINE1P05121 402 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 IL6P05231 212 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 ASAH2BP0C7U1 165 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 ACADSP16219 412 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 HOXB9P17482 250 aaPredicted RBP10.69□□□□□ -0.7
VPS29-211ENST00000553128 LAP3P28838 519 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 ARHGDIAP52565 204 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 UGT2B15P54855 530 aa10.69□□□□□ -0.7
VPS29-211ENST00000553128 BST1Q10588 318 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms