RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF426Q9BUY5 554 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 MRI1Q9BV20 369 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TREM1Q9NP99 234 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 UNC13CQ8NB66 2214 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TTC28Q96AY4 2481 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 GPR179Q6PRD1 2367 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 A0A087WUJ7 227 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TMEM235A6NFC5 223 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 OR4C45A6NMZ5 311 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 PRSS44E7EML9 344 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF254O75437 659 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 FREM3P0C091 2139 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 CTSEP14091 401 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 AKT2P31751 481 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 KCNJ3P48549 501 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SNTB1Q13884 538 aaKnown RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 CDNFQ49AH0 187 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SLC35D3Q5M8T2 416 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 MANEAQ5SRI9 462 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 GLYATL3Q5SZD4 288 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TMEM71Q6P5X7 295 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TAF8Q7Z7C8 310 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 PUSL1Q8N0Z8 303 aaKnown RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ZBTB8AQ96BR9 441 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ESRP2Q9H6T0 727 aaKnown RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ELOVL3Q9HB03 270 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 A0A0D9SG52 128 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 C5orf51A6NDU8 294 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 OR6A2O95222 327 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 PMS2P2O95744 297 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 WNT11O96014 354 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 AKR1C4P17516 323 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 PRPS1P60891 318 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SCRN3Q0VDG4 424 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 FZD2Q14332 565 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 NR0B2Q15466 257 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 MEP1BQ16820 701 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 CHST4Q8NCG5 386 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 HLA-CQ95604 372 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SLC22A18Q96BI1 424 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SLC25A36Q96CQ1 311 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 KIR3DX1Q9H7L2 352 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 FBRSQ9HAH7 460 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 PURGQ9UJV8 347 aaKnown RBP11.16□□□□□ -0.62
HDAC7-230ENST00000552960 KNTC1P50748 2209 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SPAG17Q6Q759 2223 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 A0A087WV62 115 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-230ENST00000552960 SRPX2O60687 465 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-230ENST00000552960 NKX2-2O95096 273 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CD14P08571 375 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 PRKXP51817 358 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CXADRP78310 365 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 MGAT2Q10469 447 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CCDC157Q569K6 752 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 FCRL6Q6DN72 434 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CCDC36Q8IYA8 594 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 PM20D2Q8IYS1 436 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 PRSS35Q8N3Z0 413 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CLEC1AQ8NC01 280 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 SLC22A11Q9NSA0 550 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 HEBP2Q9Y5Z4 205 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-230ENST00000552960 B4DGG1 531 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CYR61O00622 381 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 TO15178 435 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 APBB3O95704 486 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 GP1BAP07359 652 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 SPARCP09486 303 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 TAS2R19P59542 299 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 ACTBP60709 375 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 ACTG1P63261 375 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 JMJD6Q6NYC1 403 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-230ENST00000552960 CSNK1A1LQ8N752 337 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF563Q8TA94 476 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 FLVCR1-AS1Q8TAF5 88 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 THAP6Q8TBB0 222 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 C3orf49Q96BT1 292 aa11.15□□□□□ -0.62
HDAC7-230ENST00000552960 SPTBN2O15020 2390 aa11.15□□□□□ -0.63
HDAC7-230ENST00000552960 ARPC3O15145 178 aa11.14□□□□□ -0.63
HDAC7-230ENST00000552960 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 NUDT14O95848 222 aa11.14□□□□□ -0.63
HDAC7-230ENST00000552960 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 PPIAP62937 165 aaKnown RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 EIF2B1Q14232 305 aaKnown RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 PAN3Q58A45 887 aaKnown RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 ATPAF1Q5TC12 328 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-230ENST00000552960 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
HDAC7-230ENST00000552960 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
HDAC7-230ENST00000552960 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms