RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TMEM229BQ8NBD8 167 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 OR51G2Q8NGK0 314 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 TERB2Q8NHR7 220 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 MRGPRDQ8TDS7 321 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 CXorf40AQ8TE69 158 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 PPP1R1CQ8WVI7 109 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 TNFAIP8L1Q8WVP5 186 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 HMGB4Q8WW32 186 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 AUTS2Q8WXX7 1259 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 PSMG2Q969U7 264 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 ISOC2Q96AB3 205 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 ARSGQ96EG1 525 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 WDR34Q96EX3 536 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 BSCL2Q96G97 398 aaPredicted RBP4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 FAHD2AQ96GK7 314 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 TMEM19Q96HH6 336 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 WDR92Q96MX6 357 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 ARHGDIGQ99819 225 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 MICU1Q9BPX6 476 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SYT3Q9BQG1 590 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SULT4A1Q9BR01 284 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 ACBD6Q9BR61 282 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 BOCQ9BWV1 1114 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 EBPLQ9BY08 206 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC5A7Q9GZV3 580 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 PCED1AQ9H1Q7 454 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SRMSQ9H3Y6 488 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 EXO5Q9H790 373 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 CDH20Q9HBT6 801 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 MYNNQ9NPC7 610 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC17A5Q9NRA2 495 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 USP36Q9P275 1121 aaKnown RBP4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 DNAJB11Q9UBS4 358 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 OR14J1Q9UGF5 321 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 APOBEC3BQ9UH17 382 aaKnown RBP4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 STEAP1Q9UHE8 339 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SHPKQ9UHJ6 478 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 GPR52Q9Y2T5 361 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 PRSS21Q9Y6M0 314 aa4.77□□□□□ -1.65
LSM3P2-201ENST00000551246 SHROOM3Q8TF72 1996 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 KIAA1217Q5T5P2 1943 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 A0A1W2PPE2 198 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 MYBPHLA2RUH7 354 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CDHR4A6H8M9 788 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 A6NCN8 305 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NKX6-3A6NJ46 265 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 RTCAO00442 366 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TAAR5O14804 337 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NPC1O15118 1278 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PAX4O43316 350 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF208O43345 1280 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ALOX12BO75342 701 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF821O75541 412 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OPN1LWP04000 364 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TK1P04183 234 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CKMP06732 381 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SNRNP70P08621 437 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 IL6RP08887 468 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CXCL1P09341 107 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ANXA4P09525 319 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PIRTP0C851 137 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 IL9P15248 144 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PSMB6P28072 239 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TEAD1P28347 426 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR1E1P30953 314 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CD80P33681 288 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PPM1AP35813 382 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SNCAP37840 140 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 IFNGR2P38484 337 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 AKR1C3P42330 323 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR1G1P47890 313 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 DHPSP49366 369 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PDLIM4P50479 330 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF84P51523 738 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TAS2R19P59542 299 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PFN3P60673 137 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SELENOTP62341 195 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PRKCZQ05513 592 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PLA2G7Q13093 441 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PRDX4Q13162 271 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 DHRS2Q13268 280 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SGCGQ13326 291 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ELOBQ15370 118 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TCEA2Q15560 299 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CDKN3Q16667 212 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SCGB2B2Q4G0G5 96 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ACTBL2Q562R1 376 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF684Q5T5D7 378 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PRAMEF8Q5VWM4 474 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PRAMEF7Q5VXH5 474 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PTRHD1Q6GMV3 140 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2A2Q6IF42 318 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 FAM166AQ6J272 317 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 FAAP20Q6NZ36 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms