RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 SAR1BQ9Y6B6 198 aa2.08□□□□□ -2.08
CCDC38-208ENST00000549876 EIF4G1Q04637 1599 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 NEURL4Q96JN8 1562 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 LINC00854A0A1B0GVQ3 168 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CDC7O00311 574 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 BCKDKO14874 412 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 AIREO43918 545 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 EEDO75530 441 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CLPXO76031 633 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 TGM6O95932 706 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 HLA-HP01893 362 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 MBP02144 154 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 DCNP07585 359 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 RETP07949 1114 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CXCR2P25025 360 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CD82P27701 267 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 TNFSF9P41273 254 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 GLP1RP43220 463 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 NPBWR2P48146 333 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ARRB1P49407 418 aaPredicted RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 KLK7P49862 253 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 MNAT1P51948 309 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 DMTNQ08495 405 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF763Q0D2J5 394 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 SOHLH1Q5JUK2 328 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 LIN9Q5TKA1 542 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 C1orf146Q5VVC0 180 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 MLIPQ5VWP3 458 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 C1orf94Q6P1W5 598 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 SPESP1Q6UW49 350 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 Q6ZN92 141 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF571Q7Z3V5 609 aaPredicted RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF546Q86UE3 836 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 LHFPL3Q86UP9 236 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF695Q8IW36 515 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 PDIK1LQ8N165 341 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 C6orf223Q8N319 242 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 EID2Q8N6I1 236 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 DUSP18Q8NEJ0 188 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 OR5T3Q8NGG3 340 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 OR51S1Q8NGJ8 323 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 LYPD6BQ8NI32 183 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CXorf40AQ8TE69 158 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ACOT11Q8WXI4 607 aaPredicted RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 NAT6Q93015 286 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ASB9Q96DX5 294 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CERS2Q96G23 380 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 CSPG4P5Q96PW8 444 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 NRIP2Q9BQI9 281 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 RIOK2Q9BVS4 552 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 ZYG11BQ9C0D3 744 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 TREM2Q9NZC2 230 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 MYEF2Q9P2K5 600 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 LGALS13Q9UHV8 139 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 KIF25Q9UIL4 384 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 MMP17Q9ULZ9 603 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 BZW2Q9Y6E2 419 aaKnown RBP2.07□□□□□ -2.08
CCDC38-208ENST00000549876 SCN2AQ99250 2005 aa2.07□□□□□ -2.08
CCDC38-208ENST00000549876 GSTTP1A0A1W2PQM5 241 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM120BA0PK00 339 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 A6NIZ1 184 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 ZNF99A8MXY4 864 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 H7C0C1 242 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 PPP1R2P9O14990 202 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 POLR1CO15160 346 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 FCN3O75636 299 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 EIF3GO75821 320 aaKnown RBP eCLIP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CLIC3O95833 236 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 PTNP21246 168 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 ATP6V1B2P21281 511 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 AQP2P41181 271 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 SLC1A2P43004 574 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 DLX1P56177 255 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 RAP1BP61224 184 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 FAM83EQ2M2I3 478 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 C1orf100Q5SVJ3 147 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 TMIGD1Q6UXZ0 262 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 RFLNAQ6ZTI6 216 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 MRPL21Q7Z2W9 205 aaKnown RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 PEX26Q7Z412 305 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CMC1Q7Z7K0 106 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CMTM1Q8IZ96 169 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CMTM8Q8IZV2 173 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 PUSL1Q8N0Z8 303 aaKnown RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 FAM58AQ8N1B3 248 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 RNF182Q8N6D2 247 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 NKAPP1Q8N9T2 125 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 GATSQ8NAP1 163 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 DRAXINQ8NBI3 349 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 INO80EQ8NBZ0 244 aaPredicted RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 VN1R2Q8NFZ6 395 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 SLC7A13Q8TCU3 470 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 LKAAEAR1Q8TD35 194 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 CAPSLQ8WWF8 208 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 MSANTD3Q96H12 275 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 RASL11BQ9BPW5 248 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 PELOQ9BRX2 385 aaKnown RBP2.06□□□□□ -2.08
CCDC38-208ENST00000549876 TMEM175Q9BSA9 504 aa2.06□□□□□ -2.08
CCDC38-208ENST00000549876 UCK2Q9BZX2 261 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms