RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 PPIAL4FP0DN26 164 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SELLP14151 372 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF14P17017 642 aaPredicted RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ANP32AP39687 249 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 IDH2P48735 452 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 CLK1P49759 484 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SERPINB8P50452 374 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 P2RY4P51582 365 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ERVS71-1P61550 626 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 TAF11Q15544 211 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF141Q15928 474 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 MAPK14Q16539 360 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 CEACAM16Q2WEN9 425 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 HFEQ30201 348 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 TRMT5Q32P41 509 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ANXA2RQ3ZCQ2 193 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 EMBQ6PCB8 327 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 C9orf139Q6ZV77 190 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 CREB3L2Q70SY1 520 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 PRSS45Q7RTY3 260 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 EPHX4Q8IUS5 362 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 POC5Q8NA72 575 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 FAM71CQ8NEG0 241 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 CCL17Q92583 94 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SGCDQ92629 289 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 TRIM44Q96DX7 344 aaPredicted RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF75AQ96N20 296 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 TSSK3Q96PN8 268 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 TMEM237Q96Q45 408 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 OR7D2Q96RA2 312 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SLC30A2Q9BRI3 323 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 MLST8Q9BVC4 326 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 SF3B5Q9BWJ5 86 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 NUF2Q9BZD4 464 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 DPH5Q9H2P9 285 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 OR51B6Q9H340 312 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 MOV10Q9HCE1 1003 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ADPRHL2Q9NX46 363 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 DCAF16Q9NXF7 216 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 OSGIN1Q9UJX0 560 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF346Q9UL40 294 aaKnown RBP5.43□□□□□ -1.54
LIMA1-204ENST00000549064 A4GNTQ9UNA3 340 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 JRKLQ9Y4A0 524 aa5.43□□□□□ -1.54
LIMA1-204ENST00000549064 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CLDN24A6NM45 220 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CTDSP2O14595 271 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 SCN2BO60939 215 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ERLIN1O75477 346 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF432O94892 652 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 OPN1MWP04001 364 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ENO1P06733 434 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 GSTA2P09210 222 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 OPN1MW2P0DN77 364 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 OPN1MW3P0DN78 364 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CD79AP11912 226 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 GABRB1P18505 474 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 TACR3P29371 465 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 STX2P32856 288 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CD80P33681 288 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 F2RL1P55085 397 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 SH3BGRP55822 239 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CLDN17P56750 224 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 RPS23P62266 143 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 GALK2Q01415 458 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 GLO1Q04760 184 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 IMPG1Q17R60 797 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 SPRNQ5BIV9 151 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 PHYHD1Q5SRE7 291 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF678Q5SXM1 525 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 TEX35Q5T0J7 233 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 TMEM225Q6GV28 225 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 EIF3MQ7L2H7 374 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 KLBQ86Z14 1044 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 KDM8Q8N371 416 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ZBTB8BQ8NAP8 495 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 OR10S1Q8NGN2 331 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 OR5AK3PQ8NH89 298 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 DDIT4LQ96D03 193 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF764Q96H86 408 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 LINC00470Q9BZP3 86 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 NMUR2Q9GZQ4 415 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 NUAK2Q9H093 628 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 IQCGQ9H095 443 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 REEP4Q9H6H4 257 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 DECR2Q9NUI1 292 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 ARL8BQ9NVJ2 186 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 NECAP2Q9NVZ3 263 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 GAR1Q9NY12 217 aaKnown RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 B3GNT2Q9NY97 397 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 BAIAP2L1Q9UHR4 511 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 FAF1Q9UNN5 650 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-204ENST00000549064 PCDHGB5Q9Y5G0 923 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 SESN1Q9Y6P5 492 aa5.42□□□□□ -1.54
LIMA1-204ENST00000549064 CSMD3Q7Z407 3707 aa5.41□□□□□ -1.54
LIMA1-204ENST00000549064 CXorf65A6NEN9 183 aa5.41□□□□□ -1.54
LIMA1-204ENST00000549064 RPL36A-HNRNPH2H7BZ11 118 aa5.41□□□□□ -1.54
LIMA1-204ENST00000549064 EIF3HO15372 352 aaKnown RBP eCLIP5.41□□□□□ -1.54
LIMA1-204ENST00000549064 ZNF208O43345 1280 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms