RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF346Q9UL40 294 aaKnown RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TMEM5Q9Y2B1 443 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TRAV27A0A087WT01 109 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 TCRBV5S2A0A599 114 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SH3PXD2BA1X283 911 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ATP6V1G2-DDX39BF2Z307 99 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 FSHBP01225 129 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 HLA-HP01893 362 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 CRYAAP02489 173 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 CELA3BP08861 270 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 OR8G3PP0DMU2 310 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 B4GALT1P15291 398 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF14P17017 642 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-217ENST00000548420 CALCRP30988 508 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 GPR4P46093 362 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 CLRN1P58418 232 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SMIM11AP58511 58 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 CTXN1P60606 82 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 HGFACQ04756 655 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 MTX3Q5HYI7 312 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 LCN8Q6JVE9 175 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SKA3Q8IX90 412 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF786Q8N393 782 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SYT14Q8NB59 555 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 NOXO1Q8NFA2 376 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 OR4K5Q8NGD3 323 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 OR13C2Q8NGS9 318 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 FGFBP3Q8TAT2 258 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF519Q8TB69 540 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 GPA33Q99795 319 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ALG12Q9BV10 488 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 SIGLEC7Q9Y286 467 aa11.94□□□□□ -0.5
PTCH1-217ENST00000548420 ARHGAP32A7KAX9 2087 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 DNAH1Q9P2D7 4330 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 IGHV2OR16-5A0A0B4J2B6 119 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 MCIDASD6RGH6 385 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 ENTPD5O75356 428 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FABP3P05413 133 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 ATP6V1B2P21281 511 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 MAGEA2P43356 314 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FXYD6P3P58550 94 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 RAB1AP62820 205 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 GSG1Q2KHT4 349 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FGD3Q5JSP0 725 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 THEM4Q5T1C6 240 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FAM205BPQ63HN1 556 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 CYP2R1Q6VVX0 501 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FAM122BQ7Z309 247 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 ZER1Q7Z7L7 766 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 NUP37Q8NFH4 326 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 OR4F15Q8NGB8 312 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 UBE2FQ969M7 185 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 MCUR1Q96AQ8 359 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 FAM46AQ96IP4 442 aaKnown RBP11.93□□□□□ -0.5
PTCH1-217ENST00000548420 TSPAN32Q96QS1 320 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 GPX7Q96SL4 187 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-217ENST00000548420 RACGAP1Q9H0H5 632 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 UGT2A1Q9Y4X1 527 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 MMP24Q9Y5R2 645 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 V9GYQ6 96 aa11.93□□□□□ -0.5
PTCH1-217ENST00000548420 IGKV1D-43A0A0B4J1Z2 117 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 A6NIZ1 184 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 ACOT8O14734 319 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 UBL3O95164 117 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 GADD45GO95257 159 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 RNASE1P07998 156 aaKnown RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 CD14P08571 375 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 CD79AP11912 226 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF35P13682 527 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 LOXL3P58215 753 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 RAP1BP61224 184 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 SNRPD2P62316 118 aaKnown RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 RAP1AP62834 184 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 MRPS34P82930 218 aaKnown RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 MYBPC1Q00872 1141 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 FAM189A2Q15884 450 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 PGM2L1Q6PCE3 622 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 DPPA2Q7Z7J5 298 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 IGFN1Q86VF2 1251 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 DHFR2Q86XF0 187 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 KIR3DL3Q8N743 410 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 OR52J3Q8NH60 311 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 POP5Q969H6 163 aaKnown RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 NABP1Q96AH0 204 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 SLC7A6OSQ96CW6 309 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-217ENST00000548420 MAGIXQ9H6Y5 334 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 NRIP3Q9NQ35 241 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms