RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 OR2Z1Q8NG97 314 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 LINC01006Q8NI28 216 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 ITLN1Q8WWA0 313 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 NABP1Q96AH0 204 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 THOC1Q96FV9 657 aaKnown RBP10.65□□□□□ -0.7
SCAF11-208ENST00000546534 SLC30A2Q9BRI3 323 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 SPATA5L1Q9BVQ7 753 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 PAIP1Q9H074 479 aaKnown RBP10.65□□□□□ -0.7
SCAF11-208ENST00000546534 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 NANSQ9NR45 359 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 KIR2DS1A0A191URI9 304 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 TMEM178BH3BS89 294 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 ERLIN1O75477 346 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 CLPXO76031 633 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 SLC2A10O95528 541 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 PRB2P02812 416 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-208ENST00000546534 MELTFP08582 738 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 IDO1P14902 403 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 HOXB9P17482 250 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-208ENST00000546534 TNFSF4P23510 183 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 MAP2K3P46734 347 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF133P52736 654 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-208ENST00000546534 PROK1P58294 105 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 ERVK-25P63136 954 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 STX3Q13277 289 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 SGCAQ16586 387 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 C10orf128Q5T292 105 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 REEP3Q6NUK4 255 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 Q6ZPA2 131 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 RANBP3LQ86VV4 465 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-208ENST00000546534 KLBQ86Z14 1044 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 C10orf111Q8N326 155 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 TMEM86BQ8N661 226 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 SEPHS2Q99611 448 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 MCHR1Q99705 422 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 WNT5BQ9H1J7 359 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 RAD21L1Q9H4I0 556 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 SLCO1B3Q9NPD5 702 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 ASH2LQ9UBL3 628 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.64□□□□□ -0.71
SCAF11-208ENST00000546534 UGT2A1Q9Y4X1 527 aa10.64□□□□□ -0.71
SCAF11-208ENST00000546534 PRORSD1PA6NEY8 169 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 G3V4G9 280 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 KPNA4O00629 521 aaPredicted RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 CHP2O43745 196 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF205O95201 554 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 THY1P04216 161 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 F13BP05160 661 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ASAH2BP0C7U1 165 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 RPS2P15880 293 aaKnown RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 POLR2JP52435 117 aaKnown RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 FGF12P61328 243 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 GNB2P62879 340 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 CDK6Q00534 326 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 TAF11Q15544 211 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 GCNT6Q5T4J0 391 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 GPR157Q5UAW9 335 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF613Q6PF04 617 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 SLC2A7Q6PXP3 512 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF620Q6ZNG0 422 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ZER1Q7Z7L7 766 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 OR9I1Q8NGQ6 314 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 FAM71F1Q96KD3 344 aaPredicted RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 C4orf45Q96LM5 186 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 NUDT16L1Q9BRJ7 211 aaKnown RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ROPN1BQ9BZX4 212 aaPredicted RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 OR2H1Q9GZK4 316 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ROPN1Q9HAT0 212 aaPredicted RBP10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ELOVL3Q9HB03 270 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 SLC25A37Q9NYZ2 338 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 ZIM2Q9NZV7 527 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 IL19Q9UHD0 177 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 SLC13A4Q9UKG4 626 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 POMT1Q9Y6A1 747 aa10.63□□□□□ -0.71
SCAF11-208ENST00000546534 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 MCIDASD6RGH6 385 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 BLOC1S5-TXNDC5H3BN57 136 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 M0R3H8 397 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 PIN1P1O15428 100 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 GPR137BO60478 399 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 LYPD3O95274 346 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 HIST1H2ABP04908 130 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 UMPSP11172 480 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 ACADSP16219 412 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 CPT2P23786 658 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 AQP1P29972 269 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 ARHGDIAP52565 204 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 UGT2B15P54855 530 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 BPIFB3P59826 476 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 RPL15P61313 204 aaKnown RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 FMODQ06828 376 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms