RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RIMS3Q9UJD0 308 aa10.58□□□□□ -0.72
COPS7A-221ENST00000546229 PURGQ9UJV8 347 aaKnown RBP10.58□□□□□ -0.72
COPS7A-221ENST00000546229 A4GNTQ9UNA3 340 aa10.58□□□□□ -0.72
COPS7A-221ENST00000546229 PPIAL4AQ9Y536 164 aa10.58□□□□□ -0.72
COPS7A-221ENST00000546229 PCDHGB1Q9Y5G3 927 aa10.58□□□□□ -0.72
COPS7A-221ENST00000546229 ANGPT2O15123 496 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 MT-ND5P03915 603 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 HIST1H2ABP04908 130 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 THRBP10828 461 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 ZNF26P17031 533 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 DRD4P21917 467 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 GDI2P50395 445 aaKnown RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 ERFP50548 548 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 NFYCQ13952 458 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 ZMYND11Q15326 602 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 MOGQ16653 247 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 INTS11Q5TA45 600 aaKnown RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 ZNF774Q6NX45 483 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 HIST3H2AQ7L7L0 130 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 BPIFB2Q8N4F0 458 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 FAM156AQ8NDB6 213 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 ABHD4Q8TB40 342 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 NSMAFQ92636 917 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 HIST1H2ACQ93077 130 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 POP5Q969H6 163 aaKnown RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 PATZ1Q9HBE1 687 aaKnown RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 CCNB1IP1Q9NPC3 277 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 CYSLTR2Q9NS75 346 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 STX18Q9P2W9 335 aaKnown RBP10.57□□□□□ -0.72
COPS7A-221ENST00000546229 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 INSIG2Q9Y5U4 225 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 NPTNQ9Y639 398 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 NOTCH1P46531 2555 aa10.57□□□□□ -0.72
COPS7A-221ENST00000546229 KITLGP21583 273 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 CCNOP22674 350 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 PRTN3P24158 256 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 GCH1P30793 250 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 OR1E2P47887 323 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 SLC6A9P48067 706 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 RPL27P61353 136 aaKnown RBP10.56□□□□□ -0.72
COPS7A-221ENST00000546229 CD47Q08722 323 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 ZNF154Q13106 437 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 TAF11Q15544 211 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 ALG10Q5BKT4 473 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 MTX3Q5HYI7 312 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 C1orf174Q8IYL3 243 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 RASSF5Q8WWW0 418 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 THOC1Q96FV9 657 aaKnown RBP10.56□□□□□ -0.72
COPS7A-221ENST00000546229 ATP6V1G3Q96LB4 118 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 ZNF583Q96ND8 569 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 NTN4Q9HB63 628 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 TMEM106BQ9NUM4 274 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 PLEK2Q9NYT0 353 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 ZDHHC8Q9ULC8 765 aa10.56□□□□□ -0.72
COPS7A-221ENST00000546229 PLSCR5A0PG75 271 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 CLDN34H7C241 214 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 FFAR1O14842 300 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 TPD52L2O43399 206 aaKnown RBP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 FOXH1O75593 365 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 RNASE1P07998 156 aaKnown RBP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 COX5BP10606 129 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 LIPAP38571 399 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 TAS2R41P59536 307 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 SLC3A1Q07837 685 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 TOP3AQ13472 1001 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 SGCAQ16586 387 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 C9orf139Q6ZV77 190 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 FAM122BQ7Z309 247 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 SYT9Q86SS6 491 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 IGFN1Q86VF2 1251 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 LRRC28Q86X40 367 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 OR8J3Q8NGG0 315 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 TAF15Q92804 592 aaKnown RBP eCLIP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 C4orf45Q96LM5 186 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 PRRC1Q96M27 445 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 EGLN1Q9GZT9 426 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 UBAP1Q9NZ09 502 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 NUP50Q9UKX7 468 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 BAG5Q9UL15 447 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 MED31Q9Y3C7 131 aa10.55□□□□□ -0.72
COPS7A-221ENST00000546229 SOX21Q9Y651 276 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-221ENST00000546229 TRAV27A0A087WT01 109 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 A0A1B0GWJ7 208 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 ISPDA4D126 451 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 OR6C6A6NF89 314 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 H7C1C5 153 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 EDF1O60869 148 aaKnown RBP10.54□□□□□ -0.72
COPS7A-221ENST00000546229 PLATP00750 562 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 MSR1P21757 451 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 MMP16P51512 607 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 BTG1P62324 171 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 LCN6P62502 163 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 TNFAIP6P98066 277 aaPredicted RBP10.54□□□□□ -0.72
COPS7A-221ENST00000546229 PAX8Q06710 450 aa10.54□□□□□ -0.72
COPS7A-221ENST00000546229 FOXL1Q12952 345 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms