RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PRR14LQ5THK1 2151 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 A0A096LPI6 279 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ANKRD61A6NGH8 418 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CEACAM18A8MTB9 384 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 A8MVM7 634 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 IFNL4K9M1U5 179 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PPP6CO00743 305 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 MPPED1O15442 326 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ENSAO43768 121 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SUPT7LO94864 414 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 MFN2O95140 757 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SNAP29O95721 258 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 AGR2O95994 175 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CLPTM1O96005 669 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 IGHV4-59P01825 116 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SERPINA5P05154 406 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 LIPFP07098 398 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CD55P08174 381 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 UROSP10746 265 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 RPS2P15880 293 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 TAC1P20366 129 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CXCR1P25024 350 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 TACR3P29371 465 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 GABRA5P31644 462 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 RPL3P39023 403 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CCT3P49368 545 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 HTR6P50406 440 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 P2RY4P51582 365 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 UCP2P55851 309 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SEC61A1P61619 476 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SLC35A2P78381 396 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 KCNJ10P78508 379 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 DR1Q01658 176 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PAX2Q02962 417 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PMS2P3Q13401 168 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 C1DQ13901 141 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 GNA13Q14344 377 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ARHGAP11BQ3KRB8 267 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 LSM12Q3MHD2 195 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF718Q3SXZ3 478 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ATP6AP1LQ52LC2 224 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ATAD3BQ5T9A4 648 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 AP1ARQ63HQ0 302 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM53Q6P2H8 277 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 RPS27LQ71UM5 84 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 C16orf62Q7Z3J2 963 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZER1Q7Z7L7 766 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 NDUFA11Q86Y39 141 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 EPHX4Q8IUS5 362 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF283Q8N7M2 679 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SCCPDHQ8NBX0 429 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SLC30A7Q8NEW0 376 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 OR8B3Q8NGG8 313 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 OR5R1Q8NH85 324 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PSMA8Q8TAA3 256 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 SFXN5Q8TD22 340 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 OR5P2Q8WZ92 322 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 DPF1Q92782 380 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 RFKQ969G6 155 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 R3HDM4Q96D70 268 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZG16BQ96DA0 208 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 LRR1Q96L50 414 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 C3orf30Q96M34 536 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 TSPAN32Q96QS1 320 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 OR7D2Q96RA2 312 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 OR8B2Q96RD0 313 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 CCT7Q99832 543 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 MRPL57Q9BQC6 102 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 NUDT16L1Q9BRJ7 211 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 AIFM2Q9BRQ8 373 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZNF350Q9GZX5 532 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 PALMDQ9NP74 551 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 LZTFL1Q9NQ48 299 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 ZMAT5Q9UDW3 170 aaKnown RBP3.38□□□□□ -1.87
SNHG1-220ENST00000544550 STEAP1Q9UHE8 339 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 VPREB3Q9UKI3 123 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 MKLN1Q9UL63 735 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 FAM96BQ9Y3D0 163 aa3.38□□□□□ -1.87
SNHG1-220ENST00000544550 IQCMA0A1B0GVH7 501 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 CFAP73A6NFT4 308 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 A8MT66 165 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 NPIPB8E9PQR5 432 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 H3BSA7 217 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 J3KTA2 159 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 M0R3G1 203 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 M0R3H8 397 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 PHYHO14832 338 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 AIM2O14862 343 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 SURF4O15260 269 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 FCMRO60667 390 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 SEC22BO75396 215 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 CRCPO75575 148 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 FARS2O95363 451 aaKnown RBP3.37□□□□□ -1.87
SNHG1-220ENST00000544550 AHSA1O95433 338 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 FSTL3O95633 263 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 IL6RP08887 468 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-220ENST00000544550 FBP1P09467 338 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 WNT2P09544 360 aa3.37□□□□□ -1.87
SNHG1-220ENST00000544550 TFPTP0C1Z6 253 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms