RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MBP02144 154 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CRHP06850 196 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NID1P14543 1247 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 S100A2P29034 98 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 RNASE10Q5GAN6 216 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 TMEM215Q68D42 235 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TAF8Q7Z7C8 310 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NPEPL1Q8NDH3 523 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 OR6N2Q8NGY6 317 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 PPP1R14AQ96A00 147 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 KXD1Q9BQD3 176 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CCL26Q9Y258 94 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NUDT19A8MXV4 375 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 IGHV2-5P01817 119 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ZBTB25P24278 435 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 HTRA3P83110 453 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ELOCQ15369 112 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ARHGAP11BQ3KRB8 267 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ZAR1Q86SH2 424 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ZNF584Q8IVC4 421 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 PAQR4Q8N4S7 273 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 TMEM229BQ8NBD8 167 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CD300LFQ8TDQ1 290 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CXorf40AQ8TE69 158 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 FOXN4Q96NZ1 517 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 GSKIPQ9P0R6 139 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
SMG8-202ENST00000543872 A0A1B0GV50 99 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 A0A1W2PPE2 198 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 RPLP2P05387 115 aaKnown RBP11.46□□□□□ -0.57
SMG8-202ENST00000543872 KIAA0141Q14154 515 aaPredicted RBP11.46□□□□□ -0.57
SMG8-202ENST00000543872 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 GVQW1Q8N7I0 195 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 ACBD4Q8NC06 268 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 SEMA6DQ8NFY4 1073 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 ZCCHC10Q8TBK6 192 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 OCSTAMPQ9BR26 566 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 EGLN1Q9GZT9 426 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 GFOD1Q9NXC2 390 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 SERTAD3Q9UJW9 196 aa11.46□□□□□ -0.57
SMG8-202ENST00000543872 LOC100289279A0A1B0GTE1 492 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 GRXCR1A8MXD5 290 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 H0YIZ8 118 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 GPANK1O95872 356 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 IFNA2P01563 188 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 CD1AP06126 327 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 GABRA3P34903 492 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 RPS10P46783 165 aaKnown RBP11.46□□□□□ -0.58
SMG8-202ENST00000543872 GSK3AP49840 483 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 HGFACQ04756 655 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 PRDX1Q06830 199 aaKnown RBP11.46□□□□□ -0.58
SMG8-202ENST00000543872 TMEM35AQ53FP2 167 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 TMEM244Q5VVB8 128 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 C9orf131Q5VYM1 1079 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 NRROSQ86YC3 692 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 LRRC25Q8N386 305 aaPredicted RBP11.46□□□□□ -0.58
SMG8-202ENST00000543872 OR2L5Q8NG80 312 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 OR2G2Q8NGZ5 317 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 ST7LQ8TDW4 575 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.58
SMG8-202ENST00000543872 RNF126Q9BV68 326 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 PCBD2Q9H0N5 130 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 EPHX3Q9H6B9 360 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 CACFD1Q9UGQ2 172 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 APOBEC3BQ9UH17 382 aaKnown RBP11.46□□□□□ -0.58
SMG8-202ENST00000543872 KCNG2Q9UJ96 466 aa11.46□□□□□ -0.58
SMG8-202ENST00000543872 A0A1W2PPC1 479 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 ZNF860A6NHJ4 632 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 F8VVB4 439 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 F8VWA3 439 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 UPK3AO75631 287 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 ZNF735P0CB33 412 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 SQSTM1Q13501 440 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 EXOSC7Q15024 291 aaKnown RBP11.45□□□□□ -0.58
SMG8-202ENST00000543872 RPL7L1Q6DKI1 246 aaKnown RBP11.45□□□□□ -0.58
SMG8-202ENST00000543872 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 DPY19L4Q7Z388 723 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 TMEFF1Q8IYR6 380 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 VN1R3Q9BXE9 311 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 LAMP5Q9UJQ1 280 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 MBTPS2O43462 519 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 PMP2P02689 132 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 OR8U9P0C7N5 309 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 SLC35G4P0C7Q5 338 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
SMG8-202ENST00000543872 RAB5CP51148 216 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms