RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZNF32P17041 273 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 STOMP27105 288 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 APEX1P27695 318 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LAP3P28838 519 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PCSK6P29122 969 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 APLNRP35414 380 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IFNGR2P38484 337 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LIMS1P48059 325 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SELENOVP59797 346 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PCBD1P61457 104 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PPP2R2BQ00005 443 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PSG4Q00888 419 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SPIBQ01892 262 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LOXL1Q08397 574 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MSMPQ1L6U9 139 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KRTAP21-3Q3LHN1 58 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MTX3Q5HYI7 312 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LCN8Q6JVE9 175 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SMARCD3Q6STE5 483 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FOXL2NBQ6ZUU3 175 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FAM122BQ7Z309 247 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZER1Q7Z7L7 766 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LRP11Q86VZ4 500 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DHFR2Q86XF0 187 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZDHHC21Q8IVQ6 265 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZCCHC24Q8N2G6 241 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PAQR4Q8N4S7 273 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF540Q8NDQ6 660 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CPEB3Q8NE35 698 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C11orf40Q8WZ69 217 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 STMN2Q93045 179 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RSRC1Q96IZ7 334 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LRGUKQ96M69 825 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF570Q96NI8 536 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FOXN4Q96NZ1 517 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 WACQ9BTA9 647 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 NRIP3Q9NQ35 241 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ACTR3BQ9P1U1 418 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 EIF3KQ9UBQ5 218 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DUSP13Q9UII6 198 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TMCC3Q9ULS5 477 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ADAM18Q9Y3Q7 739 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IER3IP1Q9Y5U9 82 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.37□□□□□ -1.076e-7■■■□□ 16.5
TNFRSF1A-214ENST00000543048 A0A096LNT2 108 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 A0A1W2PPL8 197 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C12orf71A8MTZ7 269 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 VWC2LB2RUY7 222 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TLX2O43763 284 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CD5LO43866 347 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 OR10H3O60404 316 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KHDRBS3O75525 346 aaKnown RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TXNDC12O95881 172 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LCKP06239 509 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IGFBP1P08833 259 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FAM157BP0CG42 384 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DAOP14920 347 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF250P15622 560 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ATP6V1B2P21281 511 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MSR1P21757 451 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 USF1P22415 310 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CCNOP22674 350 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SDHAP31040 664 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RRM2P31350 389 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GDI2P50395 445 aaKnown RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RPS6KA3P51812 740 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 HMGA2P52926 109 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MS4A2Q01362 244 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KRTAP1-1Q07627 177 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CCNIQ14094 377 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CARTPTQ16568 116 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MOGQ16653 247 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RFX4Q33E94 735 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RGS7BPQ6MZT1 257 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 UNQ6126/PRO20091Q6UXV3 157 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CYP2R1Q6VVX0 501 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C10orf67Q8IYJ2 551 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C1orf174Q8IYL3 243 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 AKR7LQ8NHP1 331 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SYNPRQ8TBG9 265 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GNPDA2Q8TDQ7 276 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 POP5Q969H6 163 aaKnown RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GPX7Q96SL4 187 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GPA33Q99795 319 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SYT3Q9BQG1 590 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PIMREGQ9BSJ6 248 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF416Q9BWM5 594 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 BCL2L14Q9BZR8 327 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GPR160Q9UJ42 338 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FZR1Q9UM11 496 aa8.36□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DYSFO75923 2080 aa8.35□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LOC100509620A0A075B734 347 aa8.35□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TEX13CA0A0J9YWL9 993 aa8.35□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C5orf49A4QMS7 147 aa8.35□□□□□ -1.07
TNFRSF1A-214ENST00000543048 AQP12BA6NM10 295 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms