RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TNFSF13O75888 250 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TPPPO94811 219 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 NTN1O95631 604 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 BCHEP06276 602 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 YES1P07947 543 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 POU2F1P14859 743 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 CXCR1P25024 350 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 CD79BP40259 229 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SLC15A1P46059 708 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 RFX2P48378 723 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 IDH2P48735 452 aaKnown RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 POLR2HP52434 150 aaKnown RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TPD52P55327 224 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 DLX5P56178 289 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SIRPAP78324 504 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 MRPS34P82930 218 aaKnown RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SKP2Q13309 424 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 MED21Q13503 144 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 MAPRE2Q15555 327 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TOMM34Q15785 309 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 MAPK14Q16539 360 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 CTU2Q2VPK5 515 aaKnown RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 NDUFAF6Q330K2 333 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF311Q5JNZ3 666 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 LRIF1Q5T3J3 769 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 GCNT6Q5T4J0 391 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TMPPEQ6ZT21 453 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 PLEKHM3Q6ZWE6 761 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 FCRLAQ7L513 359 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 GALNT5Q7Z7M9 940 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 FUNDC1Q8IVP5 155 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SLC30A8Q8IWU4 369 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 FAM71CQ8NEG0 241 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 BBS10Q8TAM1 723 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SLC38A5Q8WUX1 472 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SLC35B4Q969S0 331 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 DDIT4LQ96D03 193 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ELMOD3Q96FG2 381 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TXNDC15Q96J42 360 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ADGRG7Q96K78 797 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 OR5B2Q96R09 309 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF607Q96SK3 696 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SH3GL1Q99961 368 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 NAA11Q9BSU3 229 aaPredicted RBP4.73□□□□□ -1.65
CPSF7-220ENST00000541963 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 SLC38A1Q9H2H9 487 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TMEM185BQ9H7F4 350 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 EVA1AQ9H8M9 152 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 BCL2L10Q9HD36 194 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 A4GALTQ9NPC4 353 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 NDE1Q9NXR1 346 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 KLHL28Q9NXS3 571 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF226Q9NYT6 803 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 KLHL9Q9P2J3 617 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 CHRNA9Q9UGM1 479 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 TRAPPC4Q9Y296 219 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 HDGFL3Q9Y3E1 203 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 CMAHPQ9Y471 501 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 PCNX1Q96RV3 2341 aa4.73□□□□□ -1.65
CPSF7-220ENST00000541963 ASH1LQ9NR48 2969 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 DOCK7Q96N67 2140 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 LOC100509620A0A075B734 347 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TMED7-TICAM2A0A0A6YYA0 188 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PRORSD1PA6NEY8 169 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 GPR171O14626 319 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 TNFRSF13BO14836 293 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OGG1O15527 345 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 EFNA2O43921 213 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 EIF1BO60739 113 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CTAG2O75638 210 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SERPINI2O75830 405 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 AQP8O94778 261 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PGM3O95394 542 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PMS2P2O95744 297 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 NPPAP01160 153 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CGAP01215 116 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 LYNP07948 512 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ETS2P15036 469 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF12P17014 697 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 GPX2P18283 190 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RPS4Y1P22090 263 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 C21orf33P30042 268 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SLC1A3P43003 542 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RPL5P46777 297 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF81P51508 661 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 OR2B6P58173 313 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SLC35A1P78382 337 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CDK6Q00534 326 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RBBP4Q09028 425 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RIPPLY1Q0D2K3 151 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 RASGEF1BQ0VAM2 473 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 FUT5Q11128 374 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PDK3Q15120 406 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF239Q16600 458 aaKnown RBP4.72□□□□□ -1.65
CPSF7-220ENST00000541963 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 EXOC3L2Q2M3D2 409 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CNPY1Q3B7I2 92 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 GTDC1Q4AE62 458 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 CDONQ4KMG0 1287 aa4.72□□□□□ -1.65
CPSF7-220ENST00000541963 SYT14P1Q58G82 188 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms