RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RPL38P63173 70 aaKnown RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 HBA1P69905 142 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 MRPS25P82663 173 aaKnown RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 HPCAP84074 193 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 GLO1Q04760 184 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 BNIP2Q12982 314 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PMS2P3Q13401 168 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 MFSD13AQ14CX5 517 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ZMYND11Q15326 602 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TBC1D28Q2M2D7 210 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TTMPQ5BVD1 217 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PHYHD1Q5SRE7 291 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 WBP2NLQ6ICG8 309 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ZNF774Q6NX45 483 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ZDHHC24Q6UX98 284 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TIFABQ6ZNK6 161 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 DPPA2Q7Z7J5 298 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 LDLRAD3Q86YD5 345 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 MUC20Q8N307 709 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 GALNT4Q8N4A0 578 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PAQR4Q8N4S7 273 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ADPRHL1Q8NDY3 354 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 OR4S1Q8NGB4 309 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 OR1J2Q8NGS2 313 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PNPT1Q8TCS8 783 aaKnown RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 XAGE5Q8WWM1 108 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 LRTOMTQ8WZ04 291 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 SLC25A36Q96CQ1 311 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 CCDC126Q96EE4 140 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 MARS2Q96GW9 593 aaKnown RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PLEKHA8Q96JA3 519 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 SLC35G5Q96KT7 338 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 DCLRE1CQ96SD1 692 aaKnown RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 NAPGQ99747 312 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-214ENST00000540865 PTDSS2Q9BVG9 487 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ULBP2Q9BZM5 246 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 LRMDAQ9H2I8 198 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 OR51I1Q9H343 314 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM165Q9HC07 324 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM106BQ9NUM4 274 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM216Q9P0N5 145 aa3.82□□□□□ -1.8
SNHG1-214ENST00000540865 ZSCAN5BA6NJL1 495 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CEACAM18A8MTB9 384 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 H3BSA7 217 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 K7EIL1 84 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 P2RY10O00398 339 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 AZIN1O14977 448 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 RAD51CO43502 376 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 OR2T1O43869 369 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CHEK2O96017 543 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 IGHV4-59P01825 116 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DBIP07108 87 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SFTPBP07988 381 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 ELANEP08246 267 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 LINC00032P0C843 101 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CCL2P13500 99 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 PRPS1L1P21108 318 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 RPS4Y1P22090 263 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 ACAA2P42765 397 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 IER3P46695 156 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DNAJB13P59910 316 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 FGF12P61328 243 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 ERVS71-1P61550 626 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 GNB2P62879 340 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 FUT5Q11128 374 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CHI3L2Q15782 390 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CFAP157Q5JU67 520 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 MRPL2Q5T653 305 aaKnown RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CARD17Q5XLA6 110 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CLEC6AQ6EIG7 209 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 DHRS7BQ6IAN0 325 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 TMEM53Q6P2H8 277 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 TNFAIP8L2Q6P589 184 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 C11orf88Q6PI97 169 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 C5orf46Q6UWT4 87 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 UNQ6126/PRO20091Q6UXV3 157 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 NHLRC1Q6VVB1 395 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 LRRC74BQ6ZQY2 392 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 H1FNTQ75WM6 255 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 OVCH2Q7RTZ1 564 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 NET1Q7Z628 596 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-214ENST00000540865 HMGN2P46Q86SG4 172 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 PTOV1Q86YD1 416 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 KLBQ86Z14 1044 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 UEVLDQ8IX04 471 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SKA3Q8IX90 412 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 RIMKLAQ8IXN7 391 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 CADM2Q8N3J6 435 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 SLC22A24Q8N4F4 322 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 FITM2Q8N6M3 262 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 ICA1LQ8NDH6 482 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 OR1J1Q8NGS3 322 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 OR6N1Q8NGY5 312 aa3.81□□□□□ -1.8
SNHG1-214ENST00000540865 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms