RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OTPQ5XKR4 325 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 ZNF704Q6ZNC4 412 aaPredicted RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 CXXC5Q7LFL8 322 aaKnown RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 TCEANCQ8N8B7 351 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 ZNF75AQ96N20 296 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 HCAR1Q9BXC0 346 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 POLR1DQ9Y2S0 133 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 TVP23AA6NH52 213 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 PRKYO43930 277 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 TMCC2O75069 709 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 GLCEO94923 617 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 SNAP29O95721 258 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 KRTAP10-9P60411 292 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 EFNB1P98172 346 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 NAAAQ02083 359 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 AQP6Q13520 282 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 MEP1BQ16820 701 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 KLHL12Q53G59 568 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 ADAM5Q6NVV9 412 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 PACRGLQ8N7B6 248 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 OR1J2Q8NGS2 313 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 OR6K6Q8NGW6 343 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 OR2AJ1Q8NGZ0 328 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 AKR7LQ8NHP1 331 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 C1orf198Q9H425 327 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 PLEKHF2Q9H8W4 249 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 HINT3Q9NQE9 182 aaKnown RBP13.46□□□□□ -0.25
DDB1-218ENST00000540784 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 POU2F3Q9UKI9 436 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 ATP23Q9Y6H3 246 aa13.46□□□□□ -0.25
DDB1-218ENST00000540784 CRYBG3Q68DQ2 2970 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 CASQ2O14958 399 aaPredicted RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 PEX2P28328 305 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 GSTT1P30711 240 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 APLNRP35414 380 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 CDC42P60953 191 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 ZNF584Q8IVC4 421 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 SLC30A7Q8NEW0 376 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 GJC3Q8NFK1 279 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 LILRB1Q8NHL6 650 aaPredicted RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 TMEM163Q8TC26 289 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 TRUB1Q8WWH5 349 aaKnown RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 AKAP1Q92667 903 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDB1-218ENST00000540784 HRASLS5Q96KN8 279 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 RDH12Q96NR8 316 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 WNT5BQ9H1J7 359 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 RNPEPL1Q9HAU8 725 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 MRPL22Q9NWU5 206 aaKnown RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 KCNG2Q9UJ96 466 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
DDB1-218ENST00000540784 ASH1LQ9NR48 2969 aaKnown RBP13.45□□□□□ -0.26
DDB1-218ENST00000540784 A0A1W2PPR1 153 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 ZNF593O00488 134 aaPredicted RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 PRODHO43272 600 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 SGCEO43556 437 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 STOMP27105 288 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 GGT2P36268 569 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 GDI2P50395 445 aaKnown RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 RPS7P62081 194 aaKnown RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 ADAM8P78325 824 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 APOFQ13790 326 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 ZNF672Q499Z4 452 aaPredicted RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 SLC35D3Q5M8T2 416 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 OGFRL1Q5TC84 451 aaPredicted RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 LINC01590Q5TEZ4 76 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 ZNF774Q6NX45 483 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 MYPOPQ86VE0 399 aaPredicted RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 ZNF555Q8NEP9 628 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 BBS1Q8NFJ9 593 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 KBTBD8Q8NFY9 601 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 OR4F15Q8NGB8 312 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 NEUROG1Q92886 237 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 TEAD3Q99594 435 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 WDR76Q9H967 626 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 UBTD1Q9HAC8 227 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 IMPAD1Q9NX62 359 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 SMPD3Q9NY59 655 aaPredicted RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
DDB1-218ENST00000540784 CYB5R1Q9UHQ9 305 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 SPEF1Q9Y4P9 236 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 GMPPBQ9Y5P6 360 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 LHFPL6Q9Y693 200 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 PRR14LQ5THK1 2151 aa13.44□□□□□ -0.26
DDB1-218ENST00000540784 FLNBO75369 2602 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms