RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RTN4RQ9BZR6 473 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 TINAGL1Q9GZM7 467 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 MRPL22Q9NWU5 206 aaKnown RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 RASL12Q9NYN1 266 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 MRTO4Q9UKD2 239 aaKnown RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 GTF2A1LQ9UNN4 478 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 A0A0A6YYH2 397 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 FRG2CA6NGY1 282 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 OR5H14A6NHG9 310 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 A6NJ64 397 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 M0QYG6 137 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 CD74P04233 296 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 AMY2AP04746 511 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 CD2P06729 351 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 SPARCP09486 303 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 RORAP35398 523 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF117Q03924 483 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 MFGE8Q08431 387 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 FZD2Q14332 565 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 MAMDC2Q7Z304 686 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 CATSPERDQ86XM0 798 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 GALNT16Q8N428 558 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 RELL2Q8NC24 303 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 ZNF519Q8TB69 540 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 MAP3K3Q99759 626 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 NKX3-1Q99801 234 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 TAS2R4Q9NYW5 299 aa11.06□□□□□ -0.64
NPC1-202ENST00000540608 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 GPN3Q9UHW5 284 aaPredicted RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 MRPS18BQ9Y676 258 aaKnown RBP11.06□□□□□ -0.64
NPC1-202ENST00000540608 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SPTY2D1-AS1A0A0U1RR47 76 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SLC16A7O60669 478 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 FSTP19883 344 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 RIDAP52758 137 aaKnown RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 NR0B2Q15466 257 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ACKR1Q16570 336 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ATPAF1Q5TC12 328 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 LPCAT3Q6P1A2 487 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 OR5M8Q8NGP6 311 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SLC38A3Q99624 504 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 PNO1Q9NRX1 252 aaKnown RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 SPEGQ15772 3267 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 MEGF11A6BM72 1044 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 B4DGG1 531 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ZNF736B4DX44 427 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 C10orf142B7Z368 130 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 H0YIG0 161 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 HCRTR2O43614 444 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 GMFGO60234 142 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ICOSLGO75144 302 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 CYB5AP00167 134 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 MT-ATP6P00846 226 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SLC25A4P12235 298 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 TOMM34Q15785 309 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 SGCBQ16585 318 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 POMZP3Q6PJE2 187 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 OR1J2Q8NGS2 313 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 OR10K1Q8NGX5 313 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 DNAJA3Q96EY1 480 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 PTDSS2Q9BVG9 487 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ALOX12BO75342 701 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 PLGP00747 810 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 THEGLP0DJG4 465 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ACHEP22303 614 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 CD1CP29017 333 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 GABRA4P48169 554 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ADAM8P78325 824 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 PMPCAQ10713 525 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 DHRS2Q13268 280 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ZNF345Q14585 488 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 JMJD6Q6NYC1 403 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 MOB3CQ70IA8 216 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ADGRE4PQ86SQ3 457 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 IQCF2Q8IXL9 164 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 BPIFB2Q8N4F0 458 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ADIPOR1Q96A54 375 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 SLC25A44Q96H78 314 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 ARPC5LQ9BPX5 153 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 ABHD6Q9BV23 337 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 TXNIPQ9H3M7 391 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 CGGBP1Q9UFW8 167 aaPredicted RBP11.05□□□□□ -0.64
NPC1-202ENST00000540608 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 PLCL2Q9UPR0 1127 aa11.05□□□□□ -0.64
NPC1-202ENST00000540608 LAMA1P25391 3075 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 NUPL2O15504 423 aaKnown RBP11.04□□□□□ -0.64
NPC1-202ENST00000540608 SLC25A12O75746 678 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 OR2F2O95006 317 aa11.04□□□□□ -0.64
NPC1-202ENST00000540608 APOC3P02656 99 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms