RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 IGHV2-70P01814 119 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 HKR1P10072 659 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 GUCA1AP43080 201 aaPredicted RBP10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 ERVK-25P63136 954 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 PIN1Q13526 163 aaPredicted RBP10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 CYLC2Q14093 348 aaPredicted RBP10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 TMEM155Q4W5P6 130 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 ALG10Q5BKT4 473 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 MTX3Q5HYI7 312 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 METTL21CQ5VZV1 264 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 ERICH5Q6P6B1 374 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 SYT9Q86SS6 491 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 CALHM3Q86XJ0 350 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 SPICQ8N5J4 248 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 DEFB108BQ8NET1 73 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 ATP6V1G3Q96LB4 118 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 C4orf45Q96LM5 186 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 GPA33Q99795 319 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 SIKE1Q9BRV8 207 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 WNT5BQ9H1J7 359 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 ZNF696Q9H7X3 374 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 UBAP1Q9NZ09 502 aa10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 PURGQ9UJV8 347 aaKnown RBP10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 NDRG4Q9ULP0 352 aaKnown RBP10.15□□□□□ -0.78
CBX3P4-202ENST00000540428 A8MXK9 166 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 NGFP01138 241 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 COX5BP10606 129 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 GSTM3P21266 225 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 PRTN3P24158 256 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 ZFP36P26651 326 aaKnown RBP10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 LAP3P28838 519 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 RPL27P61353 136 aaKnown RBP10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 TNFAIP6P98066 277 aaPredicted RBP10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 CDK5R2Q13319 367 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 ANKDD1AQ495B1 522 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 ARMCX4Q5H9R4 360 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 COQ5Q5HYK3 327 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 NANOGP8Q6NSW7 305 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 DOK3Q7L591 496 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 KLHL36Q8N4N3 616 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF283Q8N7M2 679 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 NPEPL1Q8NDH3 523 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 OR8J3Q8NGG0 315 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 C22orf15Q8WYQ4 148 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 LRRC58Q96CX6 371 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 SAMD8Q96LT4 415 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 PATZ1Q9HBE1 687 aaKnown RBP10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 MSL2Q9HCI7 577 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 MAN2C1Q9NTJ4 1040 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 TBCCD1Q9NVR7 557 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 PLEK2Q9NYT0 353 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 PPIAL4AQ9Y536 164 aa10.14□□□□□ -0.79
CBX3P4-202ENST00000540428 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 A6NIZ1 184 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 C12orf71A8MTZ7 269 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 TIMM8AO60220 97 aaPredicted RBP10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 NPPAP01160 153 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 SBK2P0C263 348 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF12P17014 697 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 TNFRSF1BP20333 461 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 KITLGP21583 273 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 MSR1P21757 451 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 TNFSF4P23510 183 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 CPT2P23786 658 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 IFNA8P32881 189 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 RAP1BP61224 184 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 RAP1AP62834 184 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 ST3GAL3Q11203 375 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 PSG7Q13046 419 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF154Q13106 437 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 TOP3AQ13472 1001 aaPredicted RBP10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF774Q6NX45 483 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 LRRC28Q86X40 367 aaPredicted RBP10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 SIGLECL1Q8N7X8 197 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 LRRC75AQ8NAA5 344 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 BPIFA2Q96DR5 249 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 MAGEB18Q96M61 343 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 ECSITQ9BQ95 431 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 NPHS2Q9NP85 383 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 MRGBPQ9NV56 204 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 INTS9Q9NV88 658 aaKnown RBP10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 PCDHGB1Q9Y5G3 927 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 AUP1Q9Y679 476 aa10.13□□□□□ -0.79
CBX3P4-202ENST00000540428 WNK2Q9Y3S1 2297 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 F5H0A9 414 aaPredicted RBP10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 FXYD1O00168 92 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 FBP2O00757 339 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 SURF4O15260 269 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 SHOX2O60902 331 aaPredicted RBP10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 ABHD16AO95870 558 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 IFI30P13284 250 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 OR1E2P47887 323 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms