RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 NTSR1P30989 418 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 RBMXP38159 391 aaKnown RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 RAB38P57729 211 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ZP2Q05996 745 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 MANEAQ5SRI9 462 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 NAXDQ8IW45 347 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 NANPQ8TBE9 248 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 PMM1Q92871 262 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 LPAR4Q99677 370 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 DCTN6O00399 190 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 CRTAPO75718 401 aaPredicted RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 CLDN6P56747 220 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 PRICKLE4Q2TBC4 344 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 EXOSC6Q5RKV6 272 aaKnown RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 C1orf189Q5VU69 101 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ZNF425Q6IV72 752 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 FJX1Q86VR8 437 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 CA13Q8N1Q1 262 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 OR1S1Q8NH92 325 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 BCL2L14Q9BZR8 327 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 GMEB2Q9UKD1 530 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 MEMO1Q9Y316 297 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 EFCAB7A8K855 629 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 PHYHO14832 338 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 GALR3O60755 368 aaPredicted RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 GLI4P10075 376 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ST6GAL1P15907 406 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ADRA2CP18825 462 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 HRH1P35367 487 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 ELOCQ15369 112 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 AVPI1Q5T686 147 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 C11orf87Q6NUJ2 197 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 DGAT2L6Q6ZPD8 337 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 FAM122BQ7Z309 247 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 TMEM151BQ8IW70 566 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ZNF440Q8IYI8 595 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 OR5T2Q8NGG2 359 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 OR4K15Q8NH41 348 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 C10orf90Q96M02 699 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 ZNF700Q9H0M5 742 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 B9D1Q9UPM9 204 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 DTX4Q9Y2E6 619 aa11.75□□□□□ -0.53
MSH6-210ENST00000540021 COA3Q9Y2R0 106 aaPredicted RBP11.75□□□□□ -0.53
MSH6-210ENST00000540021 A0A087WUJ7 227 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 MEGF11A6BM72 1044 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 TMEM200CA6NKL6 621 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 GLULP15104 373 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 CD80P33681 288 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 CSNK2A1P68400 391 aaPredicted RBP11.74□□□□□ -0.53
MSH6-210ENST00000540021 MEF2DQ14814 521 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 RNF141Q8WVD5 230 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 MAFIPQ8WZ33 124 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 C14orf79Q96F83 325 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 ZNF285Q96NJ3 590 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 OR11A1Q9GZK7 315 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 BANF2Q9H503 90 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 CXorf51AA0A1B0GTR3 108 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 SLC33A1O00400 549 aaPredicted RBP11.74□□□□□ -0.53
MSH6-210ENST00000540021 OR2F2O95006 317 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 GNB3P16520 340 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 CSF2RBP32927 897 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 PSG6Q00889 435 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 PPP1R1AQ13522 171 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 OR2F1Q13607 317 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 ADGRE4PQ86SQ3 457 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 BADQ92934 168 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 TOMM40LQ969M1 308 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 FAM83CQ9BQN1 747 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 NIT2Q9NQR4 276 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 VSX1Q9NZR4 365 aaPredicted RBP11.74□□□□□ -0.53
MSH6-210ENST00000540021 A0A0C4DFX4 3053 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 TMEM272A0A1B0GTI8 110 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 BCL2L11O43521 198 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 TIMP1P01033 207 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 ERGP11308 486 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 DNM1P34Q6PK57 102 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 TMEM200AQ86VY9 491 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 MRPS24Q96EL2 167 aaKnown RBP11.74□□□□□ -0.53
MSH6-210ENST00000540021 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 LYRM4Q9HD34 91 aa11.74□□□□□ -0.53
MSH6-210ENST00000540021 C14orf166Q9Y224 244 aaKnown RBP11.74□□□□□ -0.53
MSH6-210ENST00000540021 BET1O15155 118 aa11.73□□□□□ -0.53
MSH6-210ENST00000540021 MTRF1O75570 445 aaKnown RBP11.73□□□□□ -0.53
MSH6-210ENST00000540021 AQP8O94778 261 aa11.73□□□□□ -0.53
MSH6-210ENST00000540021 TPPPO94811 219 aa11.73□□□□□ -0.53
MSH6-210ENST00000540021 UTS2O95399 124 aa11.73□□□□□ -0.53
MSH6-210ENST00000540021 WNT11O96014 354 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms