RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PPP1CBP62140 327 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 PSG4Q00888 419 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 SCRN3Q0VDG4 424 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 DCAF12L2Q5VW00 463 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 SLC25A47Q6Q0C1 308 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF730Q6ZMV8 503 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 FKBP9P1Q75LS8 142 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 NRMQ8IXM6 262 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF101Q8IZC7 436 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
UBE3B-211ENST00000539843 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 NPEPL1Q8NDH3 523 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 AKR7LQ8NHP1 331 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 KLF14Q8TD94 323 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-211ENST00000539843 IPCEF1Q8WWN9 437 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-211ENST00000539843 NABP1Q96AH0 204 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 OR2J1Q9GZK6 312 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-211ENST00000539843 TUBG2Q9NRH3 451 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 PCDHB10Q9UN67 800 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 UGT2A1Q9Y4X1 527 aa13.03□□□□□ -0.32
UBE3B-211ENST00000539843 WNT9BO14905 357 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 PIP5K1CO60331 668 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 ABHD16AO95870 558 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 IGHV2-5P01817 119 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 TNFRSF1AP19438 455 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 LIMS1P48059 325 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 IFI44LQ53G44 452 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 MTX3Q5HYI7 312 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 BPIFB2Q8N4F0 458 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 RP9Q8TA86 221 aaKnown RBP13.02□□□□□ -0.33
UBE3B-211ENST00000539843 NANPQ8TBE9 248 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 MARS2Q96GW9 593 aaKnown RBP13.02□□□□□ -0.33
UBE3B-211ENST00000539843 C4orf45Q96LM5 186 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 RBM4Q9BWF3 364 aaKnown RBP13.02□□□□□ -0.33
UBE3B-211ENST00000539843 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 A4GNTQ9UNA3 340 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.33
UBE3B-211ENST00000539843 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 SURF4O15260 269 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 PLPP2O43688 288 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 AHCYL1O43865 530 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 IGHV1-46P01743 117 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 MAKP20794 623 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 WNT5AP41221 380 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 YAP1P46937 504 aaKnown RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 TNFAIP6P98066 277 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 PRKCDQ05655 676 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 HSP90B2PQ58FF3 399 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 ZNF774Q6NX45 483 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 RFPL4BQ6ZWI9 263 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 IGFN1Q86VF2 1251 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 SPICQ8N5J4 248 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 ACOT11Q8WXI4 607 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 NMD3Q96D46 503 aaKnown RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 WNT5BQ9H1J7 359 aa13.01□□□□□ -0.33
UBE3B-211ENST00000539843 FAM32AQ9Y421 112 aaKnown RBP13.01□□□□□ -0.33
UBE3B-211ENST00000539843 LOC100509620A0A075B734 347 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 LOC105371242A0A075B767 164 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 CXCR6O00574 342 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 DOK2O60496 412 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 ICMTO60725 284 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 CCDC22O60826 627 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 GMNNO75496 209 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 FOXH1O75593 365 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 VENTXO95231 258 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 ADH4P08319 380 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 COX5BP10606 129 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
UBE3B-211ENST00000539843 FPR2P25090 351 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 MPV17P39210 176 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 HTR5AP47898 357 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 MMP15P51511 669 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 SF3A3Q12874 501 aaKnown RBP eCLIP13□□□□□ -0.33
UBE3B-211ENST00000539843 RBMS3Q6XE24 437 aaKnown RBP13□□□□□ -0.33
UBE3B-211ENST00000539843 MBOAT2Q6ZWT7 520 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 C1QL2Q7Z5L3 287 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
UBE3B-211ENST00000539843 FAM162AQ96A26 154 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 RCN3Q96D15 328 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 ZNF570Q96NI8 536 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 HOPXQ9BPY8 73 aaPredicted RBP13□□□□□ -0.33
UBE3B-211ENST00000539843 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 G6PC2Q9NQR9 355 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 POLE4Q9NR33 117 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 MAN2C1Q9NTJ4 1040 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 RHCGQ9UBD6 479 aa13□□□□□ -0.33
UBE3B-211ENST00000539843 SGCEO43556 437 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 CD55P08174 381 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 CD14P08571 375 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 HILS1P60008 231 aa12.99□□□□□ -0.33
UBE3B-211ENST00000539843 LIPEQ05469 1076 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms