RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF627Q7L945 461 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 ZNF584Q8IVC4 421 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 BPIFB2Q8N4F0 458 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 GATSQ8NAP1 163 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 C8orf44Q96CB5 159 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 CHRNA10Q9GZZ6 450 aa11.94□□□□□ -0.5
UBE3B-209ENST00000539584 CACNA1IQ9P0X4 2223 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 OIP5O43482 229 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 GP1BAP07359 652 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 ADAM8P78325 824 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 FLI1Q01543 452 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PMPCAQ10713 525 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 TOMM34Q15785 309 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 ETFDHQ16134 617 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 TMEM244Q5VVB8 128 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PLPP7Q8NBV4 271 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 SLC25A44Q96H78 314 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 AMELYQ99218 206 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 RAB22AQ9UL26 194 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 R4GMQ9 66 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 CTSEP14091 401 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 NAT1P18440 290 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DRD1P21728 446 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DNASE1L1P49184 302 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 ARRB1P49407 418 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PPP1CAP62136 330 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 ODF4Q2M2E3 257 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 ASPHD2Q6ICH7 369 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PAPD4Q6PIY7 484 aaKnown RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DNM1P34Q6PK57 102 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 TMED4Q7Z7H5 227 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 OR13H1Q8NG92 308 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 OR6S1Q8NH40 331 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 MITD1Q8WV92 249 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 AQP3Q92482 292 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 DMRTA2Q96SC8 542 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 PHB2Q99623 299 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 B3GNT4Q9C0J1 378 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 TMEM185BQ9H7F4 350 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 KCNK7Q9Y2U2 307 aa11.93□□□□□ -0.5
UBE3B-209ENST00000539584 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
UBE3B-209ENST00000539584 SCN2AQ99250 2005 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 SPTY2D1-AS1A0A0U1RR47 76 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 ALG1L2C9J202 215 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 OR2T1O43869 369 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 PNPP00491 289 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 HLA-AP01891 365 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 SPARCP09486 303 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 GP1BBP13224 206 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 MYOGP15173 224 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 ZBTB25P24278 435 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 CYCSP99999 105 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 SNTB1Q13884 538 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 ERV3-1Q14264 604 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 ACKR1Q16570 336 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 OR13C8Q8NGS7 320 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 THAP6Q8TBB0 222 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 FAM174AQ8TBP5 190 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 STK35Q8TDR2 534 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 PTPMT1Q8WUK0 201 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 FBXW5Q969U6 566 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 LRRC46Q96FV0 321 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 LMF1Q96S06 567 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 CDC6Q99741 560 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 TINAGL1Q9GZM7 467 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 NXF5Q9H1B4 397 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 GAREM1Q9H706 876 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
UBE3B-209ENST00000539584 SLC22A13Q9Y226 551 aa11.92□□□□□ -0.5
UBE3B-209ENST00000539584 FANCMQ8IYD8 2048 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 A6NIZ1 184 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 A8MVM7 634 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 TO15178 435 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 HCRTR2O43614 444 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 SLC16A7O60669 478 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NPIPB7O75200 414 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 CA3P07451 260 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 CTSBP07858 339 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms