RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PTX4Q96A99 478 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PNPLA2Q96AD5 504 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SCMH1Q96GD3 660 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SLC25A44Q96H78 314 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 RNF170Q96K19 258 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ARL5BQ96KC2 179 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 HYLS1Q96M11 299 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OXGR1Q96P68 337 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SMAD5Q99717 465 aaKnown RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 GON7Q9BXV9 100 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 C1orf198Q9H425 327 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 RANBP3Q9H6Z4 567 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 GPN1Q9HCN4 374 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 RANGRFQ9HD47 186 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 APMAPQ9HDC9 416 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 NUDT15Q9NV35 164 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 MCUBQ9NWR8 336 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OCIAD1Q9NX40 245 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR52A1Q9UKL2 312 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ING4Q9UNL4 249 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 GTF2A1LQ9UNN4 478 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PTRH2Q9Y3E5 179 aaKnown RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 FREM3P0C091 2139 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TRAV8-7A0A075B6U6 113 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 NSG1A0A0A6YYJ2 146 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 A0A0B4J203 849 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 A0A1B0GUH1 482 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 LOC107986453A0A1B0GWG9 222 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 AQP7P3A6NL99 342 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 H3BML4 177 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 EIF1BO60739 113 aaKnown RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 ZNF354AO60765 605 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 SRSF10O75494 262 aaKnown RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 RBBP9O75884 186 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TGM6O95932 706 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 MAS1P04201 325 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ERCC1P07992 297 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 COX6A1P12074 109 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ICAM2P13598 275 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ZNF43P17038 809 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 IGFBP3P17936 291 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 ADRA2CP18825 462 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 PSMB1P20618 241 aaKnown RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 C4BPBP20851 252 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ACP1P24666 158 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 CDK2P24941 298 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 GIFP27352 417 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 LAP3P28838 519 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 GUCA1AP43080 201 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 PTH2RP49190 550 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 GZMKP49863 264 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 NKX2-5P52952 324 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 BIDP55957 195 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 DSCR4P56555 118 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 PSMA6P60900 246 aaKnown RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 CSNK2A1P68400 391 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 FAPQ12884 760 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TNK1Q13470 666 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 POU4F3Q15319 338 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 FAM189A2Q15884 450 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 KCNMB1Q16558 191 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TMEM225Q6GV28 225 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 OR5M10Q6IEU7 315 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 RAB12Q6IQ22 244 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TMEM53Q6P2H8 277 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ARSKQ6UWY0 536 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 C16orf47Q6ZP98 133 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 DNM1P46Q6ZS02 220 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 DCXRQ7Z4W1 244 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ADGRE4PQ86SQ3 457 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ARMC10Q8N2F6 343 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 FAM109AQ8N4B1 249 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 DEFB123Q8N688 67 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 CCDC54Q8NEL0 328 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 OR2AJ1Q8NGZ0 328 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 OR52I2Q8NH67 350 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ASB5Q8WWX0 329 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 FAM3DQ96BQ1 224 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 MED30Q96HR3 178 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 SGCZQ96LD1 299 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 IMMP1LQ96LU5 166 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 DMRTB1Q96MA1 342 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 AMELYQ99218 206 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 NAA11Q9BSU3 229 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 ANGPTL4Q9BY76 406 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ULBP3Q9BZM4 244 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 FAM117AQ9C073 453 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 STRADBQ9C0K7 418 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 C20orf85Q9H1P6 137 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 SLCO5A1Q9H2Y9 848 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 OR51J1Q9H342 316 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TP63Q9H3D4 680 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 GHITMQ9H3K2 345 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 CCDC86Q9H6F5 360 aaKnown RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 AUNIPQ9H7T9 357 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 SCPEP1Q9HB40 452 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ANKRD10Q9NXR5 420 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 SLC39A1Q9NY26 324 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 ZNF107Q9UII5 783 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 RCE1Q9Y256 329 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms