RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 STX18Q9P2W9 335 aaKnown RBP7.59□□□□□ -1.19
USP28-205ENST00000537706 SIGLEC9Q9Y336 463 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 TENM2Q9NT68 2774 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 TMEM178BH3BS89 294 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 H3BSA7 217 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 FBP2O00757 339 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 CFLARO15519 480 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 FCMRO60667 390 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 FGF4P08620 206 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 THRBP10828 461 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 PNMTP11086 282 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MAPK1P28482 360 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 SOAT1P35610 550 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 NPY4RP50391 375 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 NUDT2P50583 147 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 SLC36A2Q495M3 483 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MBNL2Q5VZF2 373 aaKnown RBP7.58□□□□□ -1.2
USP28-205ENST00000537706 VRK2Q86Y07 508 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 ZNF584Q8IVC4 421 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 DEFB107AQ8IZN7 70 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 TMEM123Q8N131 208 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 KDM8Q8N371 416 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 HIPK4Q8NE63 616 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 PNPT1Q8TCS8 783 aaKnown RBP7.58□□□□□ -1.2
USP28-205ENST00000537706 STK35Q8TDR2 534 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MAP6Q96JE9 813 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 ATAD3AQ9NVI7 634 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 ATP6V1HQ9UI12 483 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 AP3D1O14617 1153 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 AZIN1O14977 448 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 UBDO15205 165 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 TIMM8AO60220 97 aaPredicted RBP7.58□□□□□ -1.2
USP28-205ENST00000537706 FKBP6O75344 327 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 CD28P10747 220 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 CCL2P13500 99 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 EEF1B2P24534 225 aaKnown RBP7.58□□□□□ -1.2
USP28-205ENST00000537706 HSF2Q03933 536 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 SLC34A1Q06495 639 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 UGT3A2Q3SY77 523 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MTX3Q5HYI7 312 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 THEM4Q5T1C6 240 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 PGAM4Q8N0Y7 254 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MIER2Q8N344 545 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 PAQR4Q8N4S7 273 aaPredicted RBP7.58□□□□□ -1.2
USP28-205ENST00000537706 RCN3Q96D15 328 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 TSSK3Q96PN8 268 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 DPY30Q9C005 99 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 MID1IP1Q9NPA3 183 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 ZNF224Q9NZL3 707 aa7.58□□□□□ -1.2
USP28-205ENST00000537706 DOCK11Q5JSL3 2073 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 CCNOP22674 350 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
USP28-205ENST00000537706 RPL4P36578 427 aaKnown RBP7.57□□□□□ -1.2
USP28-205ENST00000537706 MAPK14Q16539 360 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 XKR7Q5GH72 579 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 FAM219BQ5XKK7 198 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 WDR25Q64LD2 544 aaPredicted RBP7.57□□□□□ -1.2
USP28-205ENST00000537706 TRIM46Q7Z4K8 759 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 CALHM3Q86XJ0 350 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 SKA3Q8IX90 412 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 C1orf87Q8N0U7 546 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 TWIST2Q8WVJ9 160 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 DDB2Q92466 427 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 CNOT9Q92600 299 aaKnown RBP7.57□□□□□ -1.2
USP28-205ENST00000537706 SLC35G5Q96KT7 338 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 NPFFR1Q9GZQ6 430 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 FAM234AQ9H0X4 552 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 KCNN2Q9H2S1 579 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 MSL2Q9HCI7 577 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 C1orf109Q9NX04 203 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 IL19Q9UHD0 177 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 DNAJC15Q9Y5T4 150 aa7.57□□□□□ -1.2
USP28-205ENST00000537706 LRRC30A6NM36 301 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SLC28A1O00337 649 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 PATE4P0C8F1 98 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 AHCYP23526 432 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 MPV17P39210 176 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 VHLP40337 213 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 ARHGDIAP52565 204 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 STX1BP61266 288 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 GUCA2AQ02747 115 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 EPS8Q12929 822 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 BNIP2Q12982 314 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 PHYHD1Q5SRE7 291 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 AP1ARQ63HQ0 302 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 ZFAND6Q6FIF0 208 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 WBP2NLQ6ICG8 309 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 LRRC74BQ6ZQY2 392 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 COMTD1Q86VU5 262 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 CADM2Q8N3J6 435 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SLC22A24Q8N4F4 322 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 OR2Z1Q8NG97 314 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 PSMA8Q8TAA3 256 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SLC25A40Q8TBP6 338 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 CCDC124Q96CT7 223 aaKnown RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 TECTBQ96PL2 329 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SIGLEC11Q96RL6 698 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms