RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CKLFQ9UBR5 152 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 LOC100289279A0A1B0GTE1 492 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 PYCARD-AS1I3L0S3 204 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 MPC2O95563 127 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 CD2P06729 351 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 FCER2P06734 321 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 FBXW4P57775 412 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 ZNF626Q68DY1 528 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 TMEM225Q6GV28 225 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 CATSPERDQ86XM0 798 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 STT3BQ8TCJ2 826 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 ASB5Q8WWX0 329 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 NPAS1Q99742 590 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 GINS4Q9BRT9 223 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 UTP23Q9BRU9 249 aaKnown RBP11.81□□□□□ -0.52
LDLR-203ENST00000535915 ATG5Q9H1Y0 275 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 ZNF224Q9NZL3 707 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 DOK2O60496 412 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 IFNA7P01567 189 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 GTF2F2P13984 249 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 BCKDHBP21953 392 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 CFPP27918 469 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 PUDPQ08623 228 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
LDLR-203ENST00000535915 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 PRSS42Q7Z5A4 293 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 BIVMQ86UB2 503 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 OR4D10Q8NGI6 311 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 OR1J4Q8NGS1 313 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 MESP1Q9BRJ9 268 aa11.81□□□□□ -0.52
LDLR-203ENST00000535915 MRPS17Q9Y2R5 130 aaKnown RBP11.81□□□□□ -0.52
LDLR-203ENST00000535915 CFAP54Q96N23 3096 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 TMEM272A0A1B0GTI8 110 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 CIB4A0PJX0 185 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 SNRPGP15A8MWD9 76 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 FTCDNL1E5RQL4 147 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 IL5P05113 134 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 ZNF250P15622 560 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 ZNF823P16415 610 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 PRSS3P35030 304 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 EXOSC2Q13868 293 aaKnown RBP11.8□□□□□ -0.52
LDLR-203ENST00000535915 OR7A5Q15622 319 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 KMT5CQ86Y97 462 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 MISPQ8IVT2 679 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 ZNF454Q8N9F8 522 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 ARL5BQ96KC2 179 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 SEMA5BQ9P283 1151 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 SUSD2Q9UGT4 822 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 PPIEQ9UNP9 301 aaKnown RBP11.8□□□□□ -0.52
LDLR-203ENST00000535915 VDAC3Q9Y277 283 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 PHF3Q92576 2039 aaKnown RBP11.8□□□□□ -0.52
LDLR-203ENST00000535915 NPIPA5E9PKD4 350 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 RLN1P04808 185 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 MECP2P51608 486 aaKnown RBP11.8□□□□□ -0.52
LDLR-203ENST00000535915 FMODQ06828 376 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 POU4F3Q15319 338 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 GLT8D1Q68CQ7 371 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 LRFN4Q6PJG9 635 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 SLC25A44Q96H78 314 aaPredicted RBP11.8□□□□□ -0.52
LDLR-203ENST00000535915 SLC22A11Q9NSA0 550 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 NPIPA1Q9UND3 350 aa11.8□□□□□ -0.52
LDLR-203ENST00000535915 LINC00862A6NCI5 91 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 MS4A18H0YCH9 400 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 M0R233 179 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ADAM10O14672 748 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 BET1O15155 118 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 BCAT2O15382 392 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 ZNF354AO60765 605 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 ICAM2P13598 275 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 HTR2CP28335 458 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 AFF3P51826 1226 aaKnown RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 C17orf67Q0P5P2 114 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 GRK1Q15835 563 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 MS4A18Q3C1V0 323 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 WDR74Q6RFH5 385 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 DCXRQ7Z4W1 244 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 LINC00346Q8IVM7 164 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 OR13C3Q8NGS6 347 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ZNF768Q9H5H4 540 aaKnown RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 MED11Q9P086 117 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 PIPOXQ9P0Z9 390 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ANKUB1A6NFN9 424 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 A6NIZ1 184 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 MAP2K6P52564 334 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 RAP1BP61224 184 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 RAP1AP62834 184 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms