RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TMEM239Q8WW34 195 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 IPCEF1Q8WWN9 437 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 HDAC2Q92769 488 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 COG8Q96MW5 612 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 SIGLEC11Q96RL6 698 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 SLC6A7Q99884 636 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 OR2H1Q9GZK4 316 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 WNT5BQ9H1J7 359 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 NARFLQ9H6Q4 476 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 RNF121Q9H920 327 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 PATZ1Q9HBE1 687 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 MAN2C1Q9NTJ4 1040 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 IL19Q9UHD0 177 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 IL20RAQ9UHF4 553 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 NDRG4Q9ULP0 352 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 NPTNQ9Y639 398 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 CACNG2Q9Y698 323 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 DOCK11Q5JSL3 2073 aa9.46□□□□□ -0.89
CLSTN3-206ENST00000535668 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 SERPINI2O75830 405 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 TNFRSF1AP19438 455 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 MAKP20794 623 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 MPV17P39210 176 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 AQP2P41181 271 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 GDI2P50395 445 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 MVKQ03426 396 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 HSF2Q03933 536 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF181Q2M3W8 571 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 MTX3Q5HYI7 312 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 AVPI1Q5T686 147 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 NANOGP8Q6NSW7 305 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 ARL9Q6T311 187 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 NKAIN4Q8IVV8 208 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 NPEPL1Q8NDH3 523 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 VANGL1Q8TAA9 524 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC25A40Q8TBP6 338 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 CCL17Q92583 94 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 SGTBQ96EQ0 304 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 RBP7Q96R05 134 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 OR2J1Q9GZK6 312 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 C20orf141Q9NUB4 165 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 DDX28Q9NUL7 540 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 RIMS3Q9UJD0 308 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 NUP50Q9UKX7 468 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 INSIG2Q9Y5U4 225 aa9.46□□□□□ -0.9
CLSTN3-206ENST00000535668 C5orf49A4QMS7 147 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 A6NIZ1 184 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 MCIDASD6RGH6 385 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 TRAPPC2LH3BP13 241 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 FXYD1O00168 92 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 ANGPT2O15123 496 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 NGFP01138 241 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 IFNA14P01570 189 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 OPN1SWP03999 348 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 F13BP05160 661 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 MTPNP58546 118 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 BPIFB3P59826 476 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 RAP1BP61224 184 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 RPL27P61353 136 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 PPP1CBP62140 327 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 RAP1AP62834 184 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 CBX1P83916 185 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 PSG7Q13046 419 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF154Q13106 437 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 CYLC2Q14093 348 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 ENDOGQ14249 297 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 ERICH5Q6P6B1 374 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 RFPL4BQ6ZWI9 263 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 RNF113BQ8IZP6 322 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 LRRC18Q8N456 261 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 PCYOX1LQ8NBM8 494 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 OR10A6Q8NH74 314 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 TMEM255BQ8WV15 326 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 C10orf82Q8WW14 230 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 GTF3AQ92664 365 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 HAVCR1Q96D42 359 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 C4orf45Q96LM5 186 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF583Q96ND8 569 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 GAL3ST1Q99999 423 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 CCNB1IP1Q9NPC3 277 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 TMEM106BQ9NUM4 274 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 MED31Q9Y3C7 131 aa9.45□□□□□ -0.9
CLSTN3-206ENST00000535668 C12orf71A8MTZ7 269 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 FBP2O00757 339 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC2A10O95528 541 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 PLATP00750 562 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 RAC2P15153 192 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 CDAP32320 146 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC9A3P48764 834 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 IL13RA1P78552 427 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ST3GAL3Q11203 375 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ALKBH6Q3KRA9 238 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ALG10Q5BKT4 473 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF774Q6NX45 483 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms