RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 C4orf45Q96LM5 186 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 FAM96BQ9Y3D0 163 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 A0A0B4J2A0 478 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 SCDO00767 359 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 XKRYO14609 159 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 GPRIN2O60269 458 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 FADS1O60427 444 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 PRAF2O60831 178 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 OR2A4O95047 310 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 TACSTD2P09758 323 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 CD53P19397 219 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 ID4P47928 161 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 CXADRP78310 365 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 DHRS2Q13268 280 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 KLHL26Q53HC5 615 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 COMMD2Q86X83 199 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 OR2A7Q96R45 310 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 NICN1Q9BSH3 213 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 PLEKHA1Q9HB21 404 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 SHPKQ9UHJ6 478 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 DHDHQ9UQ10 334 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
LPCAT3-203ENST00000535479 IGHV5-51A0A0C4DH38 117 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 A0A1B0GV50 99 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 FAM221BA6H8Z2 402 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 OR5H14A6NHG9 310 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 ATG12O94817 140 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CXCR1P25024 350 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 INSM1Q01101 510 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 GGTLC2Q14390 218 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CST11Q9H112 138 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 AKAP7Q9P0M2 348 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 D6RAR5 112 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 F5H0A9 414 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 RNH1P13489 461 aaKnown RBP12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CTRB1P17538 263 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 DLSTP36957 453 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 SLC9A3R2Q15599 337 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 DEFB133Q30KQ1 61 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CARD17Q5XLA6 110 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 GALNTL5Q7Z4T8 443 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 PXT1Q8NFP0 134 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 SLC26A10Q8NG04 563 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 OR13C3Q8NGS6 347 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 BANF2Q9H503 90 aa12.5□□□□□ -0.41
LPCAT3-203ENST00000535479 A0A1W2PPC1 479 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 GPR89AB7ZAQ6 455 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 KCNJ13O60928 360 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 HTR3BO95264 441 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 RAB40ALP0C0E4 278 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 GPR89BP0CG08 455 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 INPP5JQ15735 1006 aaPredicted RBP12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 HACD4Q5VWC8 232 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ANKRD16Q6P6B7 361 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 SPICQ8N5J4 248 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 C19orf47Q8N9M1 422 aaKnown RBP12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 CLEC1AQ8NC01 280 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 RAB40AQ8WXH6 277 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ASB12Q8WXK4 309 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ARL5BQ96KC2 179 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 IFT46Q9NQC8 304 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 SLC39A1Q9NY26 324 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 KIF25Q9UIL4 384 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 DCHS1Q96JQ0 3298 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ZNF264O43296 627 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 TNFSF14O43557 240 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 OR2T1O43869 369 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 ADAP1O75689 374 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 RENP00797 406 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 THEGLP0DJG4 465 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 NFYBP25208 207 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 CD34P28906 385 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 RBM34P42696 430 aaKnown RBP12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 DNASE1L1P49184 302 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 PRKXP51817 358 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 RPS4XP62701 263 aaKnown RBP12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 SKP2Q13309 424 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 CCINQ13939 588 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 TMEM225Q6GV28 225 aa12.49□□□□□ -0.41
LPCAT3-203ENST00000535479 COX15Q7KZN9 410 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms