RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SPATA16Q9BXB7 569 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 OPN3Q9H1Y3 402 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 ALG9Q9H6U8 611 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 NT5DC2Q9H857 520 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 THYN1Q9P016 225 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF490Q9ULM2 529 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 FOXJ3Q9UPW0 622 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 NEU3Q9UQ49 428 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 HEBP2Q9Y5Z4 205 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 FKBP7Q9Y680 259 aa3.51□□□□□ -1.85
ECHDC1-223ENST00000534442 C15orf38-AP3S2A0A0A6YYH1 394 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 A0A0J9YYE9 177 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 A0A1B0GWJ7 208 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 PRR23D1E9PI22 279 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 SOCS3O14543 225 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 IDH3BO43837 385 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 TNFSF13O75888 250 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 GOT2P00505 430 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 TRBC1P01850 177 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 IGHG1P01857 330 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 SLC35G4P0C7Q5 338 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 PRR23D2P0DMB1 279 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ADORA3P0DMS8 318 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 PAICSP22234 425 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 SLC1A6P48664 564 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 VEGFCP49767 419 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ATP12AP54707 1039 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 CAMK4Q16566 473 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 NCMAPQ5T1S8 102 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 PDPK2PQ6A1A2 396 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 SLC25A24Q6NUK1 477 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 CCDC73Q6ZRK6 1079 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 LANCL3Q6ZV70 420 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 FAM183BPQ6ZVS7 135 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 FAM131BQ86XD5 332 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 LMNTD2Q8IXW0 634 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 Q8NBF4 154 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 OR1B1Q8NGR6 318 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 OR51F2Q8NH61 342 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 UCN3Q969E3 161 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 POM121L2Q96KW2 1035 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 TTC25Q96NG3 672 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF285Q96NJ3 590 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ZFP3Q96NJ6 502 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ANKRD27Q96NW4 1050 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 CPXM1Q96SM3 734 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 CYTH2Q99418 400 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 FAM173AQ9BQD7 235 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 C11orf70Q9BRQ4 267 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 TUBGCP2Q9BSJ2 902 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 CARD6Q9BX69 1037 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 BLZF1Q9H2G9 400 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 IL1RL2Q9HB29 575 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 TNFRSF19Q9NS68 423 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF446Q9NWS9 450 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 QPCTLQ9NXS2 382 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 MBD2Q9UBB5 411 aa3.5□□□□□ -1.85
ECHDC1-223ENST00000534442 C1orf232A0A0U1RR37 186 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 A0A1W2PNV4 684 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 GOLGA8MH3BSY2 632 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 IMPA2O14732 288 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 MED7O43513 233 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 STX10O60499 249 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 RAMP1O60894 148 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 RCBTB2O95199 551 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 OR9G9P0C7N8 305 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TSPAN8P19075 237 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TBXA2RP21731 343 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 HSPA9P38646 679 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 PTGFRP43088 359 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 SLCO1A2P46721 670 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 KCNJ2P63252 427 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 PARP6Q2NL67 630 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TAF3Q5VWG9 929 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 SULT1C3Q6IMI6 304 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ATRAIDQ6UW56 229 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 CES3Q6UWW8 571 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NUFIP2Q7Z417 695 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 LHFPL4Q7Z7J7 247 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 LRRTM1Q86UE6 522 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 RANBP3LQ86VV4 465 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 GRAMD2AQ8IUY3 354 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 SBSPONQ8IVN8 264 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 HSCBQ8IWL3 235 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 PIANPQ8IYJ0 282 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 LYG1Q8N1E2 194 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 KIF2BQ8N4N8 673 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TRAM1L1Q8N609 369 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 TMEM156Q8N614 296 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF781Q8N8C0 355 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NFAM1Q8NET5 270 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 OR4F17Q8NGA8 305 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NEIL3Q8TAT5 605 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 BRSK1Q8TDC3 778 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 SMIM14Q96QK8 99 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 OR4F4Q96R69 305 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NRTNQ99748 197 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 OPRPNQ99935 248 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms