RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FAM199XQ6PEV8 388 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 ARIH2OSQ8N7S6 290 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 LINC01555Q8NAE3 123 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 LIPHQ8WWY8 451 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 C20orf27Q9GZN8 174 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 OTOL1A6NHN0 477 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 J3KTA2 159 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 JUNBP17275 347 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 VASH2Q86V25 355 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 NKAIN3Q8N8D7 197 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 NMNAT3Q96T66 252 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 OCEL1Q9H607 264 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 RLIMQ9NVW2 624 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 ZNF236Q9UL36 1845 aa10.25□□□□□ -0.77
AMBRA1-211ENST00000533727 A0A1W2PS29 197 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 NXPH2O95156 264 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 LALBAP00709 142 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 GASTP01350 101 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CELA2BP08218 269 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 GAAP10253 952 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 SDHAP31040 664 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ARRB2P32121 409 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 TGM4P49221 684 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 MEF2DQ14814 521 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 SFTPA1Q8IWL2 248 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ENTHD1Q8IYW4 607 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 OR6V1Q8N148 313 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 OR2L13Q8N349 312 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 GLYATL2Q8WU03 294 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 LMF1Q96S06 567 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 SPACA1Q9HBV2 294 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 UFSP2Q9NUQ7 469 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 LSM5Q9Y4Y9 91 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 COL11A1P12107 1806 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 UBL3O95164 117 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 HOXD4P09016 255 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CRMP1Q14194 572 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 PARP14Q460N5 1801 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 DOK3Q7L591 496 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FUNDC1Q8IVP5 155 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ZNF286AQ9HBT8 521 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 OCIAD1Q9NX40 245 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 DICER1Q9UPY3 1922 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 TMEM72A0PK05 275 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 A6NIN4 97 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FADS1O60427 444 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CBX7O95931 251 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 M6PRP20645 277 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 MAGEB1P43366 347 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CAV2P51636 162 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 CATR1Q13166 79 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FCN2Q15485 313 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 BCL2A1Q16548 175 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ACTBL2Q562R1 376 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ZNF385BQ569K4 471 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 LAX1Q8IWV1 398 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FBXL14Q8N1E6 418 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 KCNG3Q8TAE7 436 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 UBQLN3Q9H347 655 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 TXNIPQ9H3M7 391 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 MYO10Q9HD67 2058 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FAM183AA6NL82 134 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 TPPPO94811 219 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 SERPINE2P07093 398 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 QDPRP09417 244 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 RAB40ALP0C0E4 278 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 ABCD3P28288 659 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 PSMB10P40306 273 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 FAM181AQ8N9Y4 354 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 RAB40AQ8WXH6 277 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 AMBRA1Q9C0C7 1298 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 EMC7Q9NPA0 242 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 GPATCH2Q9NW75 528 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 PLA2G3Q9NZ20 509 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 OR14J1Q9UGF5 321 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 RCE1Q9Y256 329 aa10.24□□□□□ -0.77
AMBRA1-211ENST00000533727 GAPDHSO14556 408 aaPredicted RBP10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 PRAMEF4O60810 478 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 ACTL6AO96019 429 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 ANKRD34CP0C6C1 535 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 PSMB1P20618 241 aaKnown RBP10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 SERPINF1P36955 418 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 FOXF1Q12946 379 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 RAB31Q13636 194 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 CLDN22Q8N7P3 220 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 OR4K15Q8NH41 348 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 TMEM68Q96MH6 324 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 KCNJ15Q99712 375 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 PRRT1Q99946 306 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 PSD2Q9BQI7 771 aa10.23□□□□□ -0.77
AMBRA1-211ENST00000533727 FSCN3Q9NQT6 498 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms