RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 HDHD2Q9H0R4 259 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 PPIL3Q9H2H8 161 aaKnown RBP4.98□□□□□ -1.61
PCF11-205ENST00000530906 DPAGT1Q9H3H5 408 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 MOB1AQ9H8S9 216 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 NOX4Q9NPH5 578 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 B3GAT2Q9NPZ5 323 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 ING3Q9NXR8 418 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 TAS2R8Q9NYW2 309 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 KLHL13Q9P2N7 655 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 FOXJ3Q9UPW0 622 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 PCDHGA9Q9Y5G4 932 aaKnown RBP4.98□□□□□ -1.61
PCF11-205ENST00000530906 NUBP2Q9Y5Y2 271 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 CACNG2Q9Y698 323 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 ASXL3Q9C0F0 2248 aa4.98□□□□□ -1.61
PCF11-205ENST00000530906 IGHV1-45A0A0A0MS14 117 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 C7orf66A4D0T2 115 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SMIM30A4D0T7 59 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 FAM172BPA6NC97 362 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ACOD1A6NK06 481 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TMEM200CA6NKL6 621 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 GJE1A6NN92 205 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 C11orf98E9PRG8 122 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 INMT-MINDY4F8WBC2 141 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 MS4A18H0YCH9 400 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ACOT7O00154 380 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 DCTN6O00399 190 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ZNF593O00488 134 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 RGS13O14921 159 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PRKNO60260 465 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 PSPNO60542 156 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 EIF1BO60739 113 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR2J2O76002 312 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SCGNO76038 276 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PMS2P2O95744 297 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 IGHG1P01857 330 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 HLA-DQA2P01906 255 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PSKH1P11801 424 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ACHEP22303 614 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 DPP4P27487 766 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ERP29P30040 261 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 FAUP35544 74 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 FOLR3P41439 243 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ART1P52961 327 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 HCCSP53701 268 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR10A3P58181 314 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 ADAM8P78325 824 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SLC35A1P78382 337 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 FOXF1Q12946 379 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 FAM189A2Q15884 450 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 MEP1BQ16820 701 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TATDN3Q17R31 274 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 MS4A18Q3C1V0 323 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SLC25A35Q3KQZ1 300 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ZFP69Q49AA0 526 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PLA1AQ53H76 456 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TRIM61Q5EBN2 209 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ELFN2Q5R3F8 820 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TMEM244Q5VVB8 128 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TSSK4Q6SA08 328 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 FAM198BQ6UWH4 519 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 STAC2Q6ZMT1 411 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 DBX2Q6ZNG2 339 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SLC35D2Q76EJ3 337 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 LINGO2Q7L985 606 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 KRT77Q7Z794 578 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PLCZ1Q86YW0 608 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 GLB1L2Q8IW92 636 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 UEVLDQ8IX04 471 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 CDH26Q8IXH8 852 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 GTPBP8Q8N3Z3 284 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 TOMM5Q8N4H5 51 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 CCDC54Q8NEL0 328 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR2M3Q8NG83 312 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR4K17Q8NGC6 315 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR6X1Q8NH79 312 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 LGALS14Q8TCE9 139 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 THEM6Q8WUY1 208 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ZNRF4Q8WWF5 429 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 RGP1Q92546 391 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 YIPF5Q969M3 257 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 RELTQ969Z4 430 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TMEM106AQ96A25 262 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 PTX4Q96A99 478 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 C8orf44Q96CB5 159 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 NTNG2Q96CW9 530 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 SLC25A44Q96H78 314 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 IMMP1LQ96LU5 166 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 C5orf34Q96MH7 638 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OXGR1Q96P68 337 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 TSSK2Q96PF2 358 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 NEDD4LQ96PU5 975 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ABHD6Q9BV23 337 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 DDA1Q9BW61 102 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ANGPTL4Q9BY76 406 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 B3GNT4Q9C0J1 378 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 STRADBQ9C0K7 418 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 OR11A1Q9GZK7 315 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms