RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 OVCH1Q7RTY7 1134 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 MRGPREQ86SM8 312 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 KMT5CQ86Y97 462 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 GPSM1Q86YR5 675 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 C9orf40Q8IXQ3 194 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 MAML2Q8IZL2 1156 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 GPC2Q8N158 579 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 GALNT16Q8N428 558 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 TTC9BQ8N6N2 239 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 HORMAD2Q8N7B1 307 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 CLEC18CQ8NCF0 446 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 KREMEN2Q8NCW0 462 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 OR4K17Q8NGC6 315 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 OR13C4Q8NGS5 318 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 LYPD6BQ8NI32 183 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 SECTM1Q8WVN6 248 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 SPRYD4Q8WW59 207 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 TMED6Q8WW62 240 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 FAM168AQ92567 244 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 FBXO32Q969P5 355 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 IMP4Q96G21 291 aaKnown RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 TP53RKQ96S44 253 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 LPAR4Q99677 370 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 MIEN1Q9BRT3 115 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 PBDC1Q9BVG4 233 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 ANGPTL4Q9BY76 406 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 SLITRK2Q9H156 845 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 PDE7BQ9NP56 450 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 MYNNQ9NPC7 610 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 KCNJ16Q9NPI9 418 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 MKKSQ9NPJ1 570 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 INPP5EQ9NRR6 644 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 SEMA4GQ9NTN9 838 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 TDP1Q9NUW8 608 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 AURKAIP1Q9NWT8 199 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 TMEM161AQ9NX61 479 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 CACNG4Q9UBN1 327 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 KCNG2Q9UJ96 466 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 ZNF214Q9UL59 606 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 ANGPT4Q9Y264 503 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 ZNF337Q9Y3M9 751 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
CD44-225ENST00000527326 COLEC10Q9Y6Z7 277 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 TSC2P49815 1807 aa5.27□□□□□ -1.57
CD44-225ENST00000527326 ZSWIM8A7E2V4 1837 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ARID1BQ8NFD5 2236 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 MGAT4DA6NG13 374 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 A8MVM7 634 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 H7BY64 318 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 DCTN6O00399 190 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 MANBAO00462 879 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CCL25O15444 150 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF264O43296 627 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF208O43345 1280 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 B4GALT3O60512 393 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SRPX2O60687 465 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 WDR1O75083 606 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ARL6IP5O75915 188 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLCO2B1O94956 709 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 HPRT1P00492 218 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 KNG1P01042 644 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 HLA-DQB2P05538 268 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 DCNP07585 359 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 OR2T7P0C7T2 308 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZNF865P0CJ78 1059 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 OR5H8P0DN80 308 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SELEP16581 610 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SERPINA2P20848 420 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 FCARP24071 287 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 EPHA8P29322 1005 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 OTX1P32242 354 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 TAGLN2P37802 199 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 LPAR6P43657 344 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RPL29P47914 159 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 GABRA4P48169 554 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CDKN1CP49918 316 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 AGTR2P50052 363 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 P2RX1P51575 399 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RENBPP51606 427 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 PDX1P52945 283 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 HTD2P86397 168 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CYCSP99999 105 aaKnown RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 CDK5Q00535 292 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 TIAL1Q01085 375 aaKnown RBP eCLIP5.26□□□□□ -1.57
CD44-225ENST00000527326 ACVR1Q04771 509 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ZP2Q05996 745 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 CACNG1Q06432 222 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RASGEF1BQ0VAM2 473 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SCGB2A2Q13296 93 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 ELOBQ15370 118 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RGNQ15493 299 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 UGCGQ16739 394 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 PCGF3Q3KNV8 242 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 SLC25A35Q3KQZ1 300 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 PRAMEF20Q5VT98 475 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 MFSD14CQ5VZR4 134 aa5.26□□□□□ -1.57
CD44-225ENST00000527326 RNF219Q5W0B1 726 aaPredicted RBP5.26□□□□□ -1.57
CD44-225ENST00000527326 PAQR3Q6TCH7 311 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms