RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HOXA4Q00056 320 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-210ENST00000521646 PSG4Q00888 419 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 PAX2Q02962 417 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 C10orf128Q5T292 105 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF613Q6PF04 617 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 DOK3Q7L591 496 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 SLC16A14Q7RTX9 510 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 KIRREL3Q8IZU9 778 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 RBM15BQ8NDT2 890 aaKnown RBP9.31□□□□□ -0.92
CSMD1-210ENST00000521646 HIPK4Q8NE63 616 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 NANPQ8TBE9 248 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 KLF14Q8TD94 323 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-210ENST00000521646 TMEM255BQ8WV15 326 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 SUCNR1Q9BXA5 334 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 RNF121Q9H920 327 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 UBAP1Q9NZ09 502 aa9.31□□□□□ -0.92
CSMD1-210ENST00000521646 POLR3KQ9Y2Y1 108 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-210ENST00000521646 TMEM247A6NEH6 219 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 J3QLI3 93 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 FMO6PO60774 539 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 HTR3BO95264 441 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 THRBP10828 461 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 CCNOP22674 350 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 SLC6A2P23975 617 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 LIMS1P48059 325 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 NCALDP61601 193 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 ERVK-25P63136 954 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 DBPQ10586 325 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-210ENST00000521646 ZMYND11Q15326 602 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 TBC1D28Q2M2D7 210 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 PCGF3Q3KNV8 242 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 REP15Q6BDI9 236 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 SLC25A47Q6Q0C1 308 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 BPIFB2Q8N4F0 458 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 C11orf40Q8WZ69 217 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 NSMAFQ92636 917 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-210ENST00000521646 GAL3ST1Q99999 423 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
CSMD1-210ENST00000521646 NANSQ9NR45 359 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 PURGQ9UJV8 347 aaKnown RBP9.3□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF229Q9UJW7 825 aa9.3□□□□□ -0.92
CSMD1-210ENST00000521646 ISPDA4D126 451 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 C5orf49A4QMS7 147 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 F5H0A9 414 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 BLOC1S5-TXNDC5H3BN57 136 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 BCL10O95999 233 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ADH4P08319 380 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ACADSP16219 412 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF12P17014 697 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 MDKP21741 143 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 OMGP23515 440 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 PRTN3P24158 256 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 STOMP27105 288 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 CD80P33681 288 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 SLC18A1P54219 525 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 MRPS34P82930 218 aaKnown RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 PSG7Q13046 419 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF154Q13106 437 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ENDOGQ14249 297 aaKnown RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 SLC9A3R2Q15599 337 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 HFEQ30201 348 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 AGKQ53H12 422 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 MBNL2Q5VZF2 373 aaKnown RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF774Q6NX45 483 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 TMEM53Q6P2H8 277 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 LEG1Q6P5S2 330 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 REC114Q7Z4M0 266 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 RANBP3LQ86VV4 465 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 KRT73Q86Y46 540 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 LRRC75AQ8NAA5 344 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 DCLRE1CQ96SD1 692 aaKnown RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 SPATA5L1Q9BVQ7 753 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 BCL2L14Q9BZR8 327 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 OR2H1Q9GZK4 316 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 CACYBPQ9HB71 228 aaKnown RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 DECR2Q9NUI1 292 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 SLCO1C1Q9NYB5 712 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-210ENST00000521646 FBXL3Q9UKT7 428 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 INSIG2Q9Y5U4 225 aa9.29□□□□□ -0.92
CSMD1-210ENST00000521646 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
CSMD1-210ENST00000521646 TRAPPC13A5PLN9 417 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 PRORSD1PA6NEY8 169 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 IMPA2O14732 288 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 TPD52L2O43399 206 aaKnown RBP9.28□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF205O95201 554 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 IGHG1P01857 330 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 CD55P08174 381 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 ANPEPP15144 967 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 RAC2P15153 192 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 ZNF26P17031 533 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-210ENST00000521646 LAP3P28838 519 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 SLC6A9P48067 706 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 CLRN1P58418 232 aa9.28□□□□□ -0.92
CSMD1-210ENST00000521646 SLC36A2Q495M3 483 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms