RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 TAF15Q92804 592 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAM1-204ENST00000521049 C4orf45Q96LM5 186 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 PRSS27Q9BQR3 290 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 OR2H1Q9GZK4 316 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 WNT5BQ9H1J7 359 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 TUBG2Q9NRH3 451 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 OR5V1Q9UGF6 321 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
TRAM1-204ENST00000521049 GMNCA6NCL1 334 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PLATP00750 562 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 IGF2P01344 180 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 MT-ND1P03886 318 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 WNT2P09544 360 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 IGHV4-38-2P0DP08 117 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 NR2C1P13056 603 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PCGF2P35227 344 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PCBD1P61457 104 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 ERVK-25P63136 954 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PAX2Q02962 417 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 ZMYND11Q15326 602 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 LRRN1Q6UXK5 716 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 TSPYL5Q86VY4 417 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PARP8Q8N3A8 854 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 UPRTQ96BW1 309 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 PRDM13Q9H4Q3 707 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 MAN2C1Q9NTJ4 1040 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 ARMCX1Q9P291 453 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-204ENST00000521049 IL19Q9UHD0 177 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 LRCH1Q9Y2L9 728 aa13.79□□□□□ -0.2
TRAM1-204ENST00000521049 IGKV1D-43A0A0B4J1Z2 117 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 NPIPB13A6NJU9 1138 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 NPIPB4C9JG80 1138 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 GPANK1O95872 356 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 KNG1P01042 644 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 OPN1SWP03999 348 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 CST2P09228 141 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 OMGP23515 440 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 MDH2P40926 338 aaKnown RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 AQP2P41181 271 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 HNRNPA0Q13151 305 aaKnown RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 BTNL3Q6UXE8 466 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 MUC20Q8N307 709 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 VANGL1Q8TAA9 524 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 LIPHQ8WWY8 451 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 NSMAFQ92636 917 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 HDAC2Q92769 488 aaKnown RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 NANOGQ9H9S0 305 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 BEX1Q9HBH7 125 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 PPP1R3CQ9UQK1 317 aa13.78□□□□□ -0.2
TRAM1-204ENST00000521049 SOX21Q9Y651 276 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-204ENST00000521049 SURF4O15260 269 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 OR7A10O76100 309 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 TGDSO95455 350 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 VWFP04275 2813 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 CD247P20963 164 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 GSTM3P21266 225 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 LAP3P28838 519 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 GUCA1AP43080 201 aaPredicted RBP13.77□□□□□ -0.21
TRAM1-204ENST00000521049 TAF11Q15544 211 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 SYT9Q86SS6 491 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 PATL1Q86TB9 770 aaKnown RBP13.77□□□□□ -0.21
TRAM1-204ENST00000521049 SLC30A8Q8IWU4 369 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 CMYA5Q8N3K9 4069 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 OR2Z1Q8NG97 314 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 FNDC8Q8TC99 324 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
TRAM1-204ENST00000521049 RBP7Q96R05 134 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 TXNIPQ9H3M7 391 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 TBCCD1Q9NVR7 557 aa13.77□□□□□ -0.21
TRAM1-204ENST00000521049 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
TRAM1-204ENST00000521049 IGHV3OR16-10A0A075B7F0 116 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 CEACAM18A8MTB9 384 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 TMEM178BH3BS89 294 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 IFNL4K9M1U5 179 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 POLR3GO15318 223 aaPredicted RBP13.76□□□□□ -0.21
TRAM1-204ENST00000521049 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
TRAM1-204ENST00000521049 COX5BP10606 129 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 KITLGP21583 273 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
TRAM1-204ENST00000521049 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
TRAM1-204ENST00000521049 FMODQ06828 376 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 CD47Q08722 323 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 LAPTM4AQ15012 233 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 CYP51A1Q16850 503 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
TRAM1-204ENST00000521049 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms